- Region 'REG00001434'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S166:47119-47469|Otx
Short name
n/a
Region ID
REG00001434
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Alicia Madgwick (2018-05-29)
Annotator
Marion Gueroult-Bellone (2018-05-29)
Curator
Marion Gueroult-Bellone (2018-05-29)
This 351bp sequence, located upstream of Otx (S166.g04580), drives reporter gene expression in endoderm.
47,11947,469
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [47,119 / 47,469] on scaffold S166
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : tttaaatggtattggtcaacga Reverse : acaaagccggtcaagtatgc
Show sequence
Length: 351
tttaaatggtattggtcaacgactttgaataatctgatgtcaaattatatttgtgcacgc
attttagcaatgtcctgctctgtctgtgtttgtacggtagcagtcgaattaaacaacgac
cgggactttgaaacacgcgaagactttgtttgcggagtctgttcccggttacggcctgct
ctaacctttcctgccccaatagacaaatcaaagagatcatgtttagtgacatgtgcaaga
gtttacaccctaaacgacctctgctgtctgtccggacgaatcgtaggccatcgcgttcgc
aactgaccaaccctttgtggtttcaagtattgcatacttgaccggctttgt
