- Region 'REG00001433'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S166:50503-50840|Otx
Short name
n/a
Region ID
REG00001433
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Alicia Madgwick (2018-05-29)
Annotator
Marion Gueroult-Bellone (2018-05-29)
Curator
Marion Gueroult-Bellone (2018-05-29)
This 337bp sequence, located in the third intron of Otx (S166.g04580), drives reporter gene expression in the sensory vesicle.
50,50350,839
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [50,503 / 50,839] on scaffold S166
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : accgtggattatcgctttctaa Reverse : gccaagaacaaagggacaaa
Show sequence
Length: 337
accgtggattatcgctttctaaagtattatgtttatccctctttactgtacaccaccctt
tcaccaagccatcgccgcacaagcgttgcgaacagcaccgcgctgaaatcgcgtcatcgc
cggcaaacacattgtgcggcggggcggggttggttgggtcggttcgatcgcgagaagcaa
aatgggcgaaagcgtgattagcggcgctgctcgagtgtgggaaagctgcacgacgcgtct
ttattaaaaagtgcagccccatgcagcgatatcggcttattatttggtctacaacttcga
agttcccacgttgggcatttgtccctttgttcttggc
