- Region 'REG00001431'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S166:47798-48149|Otx
Short name
n/a
Region ID
REG00001431
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(extended_promoter)
Author
Damien Gailly (2018-05-29)
Annotator
Marion Gueroult-Bellone (2018-05-29)
Curator
Marion Gueroult-Bellone (2018-05-29)
This 352bp sequence, located upstream of Otx (S166.g04580), drives reporter gene expression in mesenchyme, TVC and muscle.
47,79848,149
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [47,798 / 48,149] on scaffold S166
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : tttgcctaggttccgattgt Reverse : acctttggctcagctcattg
Show sequence
Length: 352
tttgcctaggttccgattgttgtcaccctcggaccgggccagagttccttgtcgaccttt
tttctctttatcactcctatttccttgtttctttcattgcagagaggagtactgtccacc
ctcgctggtttgtttcttttttcatgcaacgagcgctcaattcgctccttgcctcttccc
tttttcgtttttccaatcactcgaccggagcttaaatcgagcgcaaatgcttgcattttg
attacttgctcttgatatcctcgtgacaacacatcactcttatccgattgtgacgtgtag
actgactttagaagcagtttttaatccactggcaatgagctgagccaaaggt
