- Region 'REG00001420'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S253:122472-122988|FoxD
Short name
n/a
Region ID
REG00001420
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Alicia Madgwick (2018-05-28)
Annotator
Marion Gueroult-Bellone (2018-05-28)
Curator
Marion Gueroult-Bellone (2018-05-28)
This 517bp sequence, located upstream of FoxD (S253.g06179), drives reporter gene expression in muscle.
CONS00001442: p.Phmamm.REG.CG.MTP2014.S253:122472-122988>LacZ
122,472122,988
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [122,472 / 122,988] on scaffold S253
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : caattgcgcatatttatactcttga Reverse : tcttttacacttataaccttcagttgc
Show sequence
Length: 517
caattgcgcatatttatactcttgaaataatccatattggcccttgttacattttggaca
tcaccgtattcaagtccttgataagacgaaaggaaagcgtcagatgtactgactgatcag
acaagtctacaaggcatgcgacagttagatctcaaacaggccattatcaccttagcagtc
aactgaagtcggaccaagcaagcaagttaggttagtgataggcgcaacgcactttcattt
gtcgcttatcactatttgcattcgatcccttgtaatgataactttgtggcgcgcctacca
aagtcgtacacaggcctatgtggtcgtttgttctgccgctgtaaggctggaatctgggct
ttggaagtccgcggcaaaaaaatagctcggactagttaaatagtgcgagccagtaacatt
tctccatcagttgaatttcaacaatggttgaacaccagcaagtacaataaagtgggtgta
aaacctaatagcaactgaaggttataagtgtaaaaga
