- Region 'REG00001419'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S253:124203-124750|FoxD
Short name
n/a
Region ID
REG00001419
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(extended_promoter)
Author
Alicia Madgwick (2018-05-28)
Annotator
Marion Gueroult-Bellone (2018-05-28)
Curator
Marion Gueroult-Bellone (2018-05-28)
This 548bp sequence, located upstream of FoxD (S253.g06179), drives reporter gene expression in endoderm, muscle and sensory vesicle.
CONS00001441: p.Phmamm.REG.CG.MTP2014.S253:124203-124750>LacZ
124,203124,750
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [124,203 / 124,750] on scaffold S253
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : agagagagctttgtcctcgtg Reverse : tccgaacataggcacattttt
Show sequence
Length: 548
agagagagctttgtcctcgtgccccaattaattatcgatatcaaagagtaactttgcaag
cacaatatctataatcagtttgtagattggaaataacaaacgccacggcgcctttcagaa
gctaatcagttttgatgcgtaattcaaacacattgggcgtttggagttccgaacttatct
taagtcggcgctctaatcccccaacgttggacttggctttgattgtggaatatttgttag
gggccgcacgcatcagacacgcgtgacttttttctctgccttagagacgcagcgaaaaaa
tggacatatattcgcggtcggttgttgattgagatatacatttgcgctttgtgcattgtg
aagtcagacctcgaagtagccaatgctcagcaagctacttaagtacagtgttaacttgaa
gctagtcagtcgcttaacatgagtcgtatgtatattactacacagttagtcagaaattaa
aagtatacagatataatatatgtgagggtcagaagacttggcgccggaaaaatgtgccta
tgttcgga
