- Region 'REG00001410'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S128:60456-61171|Fgf9/16/20
Short name
n/a
Region ID
REG00001410
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(enhancer)
Author
Damien Gailly (2018-05-28)
Annotator
Marion Gueroult-Bellone (2018-05-28)
Curator
Marion Gueroult-Bellone (2018-05-28)
This 716bp sequence, located in the first intron of Fgf9/16/20 (S128.g03805), drives reporter gene expression in mesenchyme, notochord, brain and muscle.
60,45661,171
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [60,456 / 61,171] on scaffold S128
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : atggcaaattggcgtaaatg Reverse : gacgctgctgaacaacaaaa
Show sequence
Length: 716
atggcaaattggcgtaaatgcctttatggaggttttccggtgtcatgaaaccgcgcttgg
tgcgaatattaattcgatgaacagatgtttcgaagcgacgccactggccataaagatagt
gcagcgcgatgcccctgcgtcagcagtcggcgcactttcgtaccaacacaaaacagcaaa
ttaccagtctacgaggcgcaaataagctcctaaacggcgacaaattagtgacaccgcccc
ccggctcattcaattcgcagcgcggtcatcgtggcaacagttactttctcggggcagtca
tatttcgataattacaacagataagtacaggtgattagttgcattcgagcgatgcataca
cgccacgctcttttgtctatgaaaagcaattagtgttcgaattggagcattgttaccgct
tagggcaaaccaaccacgctcgttttcgcgcgatcacacctccagcaagcagttggacaa
catacccgagaatatttcacccctgtcgctcattacggacccattaaccgcccgtgcgct
caaaaccgctgcgtctctaagccaatcaccaacagcgaaggcaagctgggcgttttcaca
cgtgttcttggcgtcgcatcgccgggagatccaaaccctaatgcccaagtaatgttggca
caagccgttttttcgcggttgctcgtagcacgatagttttgttgttcagcagcgtc
