- Region 'REG00001498'
Cis-regulatory Region
Name
Cirobu.REG.KhC6.1502506-1503107|Neurogenin
Short name
n/a
Region ID
REG00001498
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(RNApol_II_core_promoter)
Author
Alberto Stolfi (2019-03-11)
Annotator
Marion Gueroult-Bellone (2019-03-11)
Curator
Marion Gueroult-Bellone (2019-03-11)
1,502,5061,503,107
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [1,502,506 / 1,503,107] on scaffold KhC6
The basal promoter of Neurog was cloned using the primers Neurog −594 forward (5′-GGTCATGCTTTGTTACGTCC-3′) and Neurog +9 reverse (5′-ATCCAACAT TTTGTAGCAAGAGC-3′)
Show sequence
Length: 602
ggtcatgctttgttacgtcccagagtcaaggtcaggtattggcccggtcgtctgttcggt
ttttgagattcgtttccactcggaaaacgctattgtttcatcgctatccatttgtttgct
aacgtctaagtcgccgcccgcatttgctggaagatttgccttttttctccgatttgtgac
gtcacagtgcttcggctgatctctctgtttcatcccgatgcgcctttttctctactttct
ctcggagctatataagcagatcgtaatttctactttcactataatctgttttggttctac
agagcccagtggctcatatttgcagaatgcattcgcagcatttctggcaaatatttcgta
ttaacaaaacctgtcaggccagggctttttgcaaaaggcattgtgacatatattttgtat
atgtcaaactctagctaaagtttaaagttattcaaaactattttaggaaagtacggagag
cagaataccatattttattgctaaaatttctttttcttcagaaacttaacaaatatctta
tttcatttcagatttcaatcttgatattataaaaattttgctcttgctacaaaatgttgg
at
