- Region 'REG00001486'
Cis-regulatory Region
Name
Cirobu.REG.KH2012.C12.3766830-3767619
Short name
n/a
Region ID
REG00001486
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Alicia Madgwick (2019-01-08)
Annotator
Patrick Lemaire (2019-01-08)
Curator
Delphine Dauga (2019-01-17)
3,766,8303,767,619
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [3,766,830 / 3,767,619] on scaffold KhC12
Primer used for cloning : Forward : tcggttcgcattatttgg Reverse : caccgtttcgtatatagtttttgt
Show sequence
Length: 790
TCGGTTCGCATTATTTGGcagtgccaactaaaatgaacttgtgattggatgttaaataat
aaatgcaggtcgtattgcgttcattcgacaatcttcgcgtagagatgatcaaagatttat
aaaatatagtgtgccagtgccggattatagcagaataaacacgttttggagggggaatgc
gttcatattcggttattggagatatggctaacaggaaatagacttatgtgtgtattagga
aaacttgtatgtgtgtgttgtattcggagttgtttcttgagtgattcagttatactctac
ttgtttatatagcgctatacactttcgagtaatagtactaagtggtctcgattaattact
aaaccgtattgattctggcgtttattttattgctgattaacattaggggaacgccggaaa
agctctgcctgcggtataagacgagcgcgtggctggcgtgtttgtctgaaggaaaaaagg
agaatgcgcaagattcttttttcgagtgcgggttttggaaagacaagagccatgactgac
gttcgtaactgagtagtaagtgagtagaagaagcgatagtcccaagtgcgatatatgtta
actgcgcttgccacacgccatcagaatggtagtgacaacgacccatacagggctggtaaa
agaggcaaataattgcaagtgcaaacaatttcgaaagactgaaacattctacagcggaca
aaatttctgcagtgcagaacttaagagcaaagtttcaaagtcagttACAAAAACTATATA
CGAAACGGTG
