- Region 'REG00001407' >
- Region 'REG00001485'
Cis-regulatory Region
Name
Cirobu.REG.KH2012.C10.3635600-3636699
Short name
n/a
Region ID
REG00001485
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
inactive_region
Author
Alicia Madgwick (2019-01-08)
Annotator
Patrick Lemaire (2019-01-08)
Curator
Delphine Dauga (2019-01-17)
3,635,6003,636,699
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [3,635,600 / 3,636,699] on scaffold KhC10
Primer used for cloning : Forward : ggtaaaatataaacatttagtgctaaga Reverse : catagtttataaaagtacaagtaaaattaacc
Show sequence
Length: 1,100
GGTAAAATATAAACATTTAGTGCTAAGAattttaaaaattctggagtaaagtttctttcc
gagcattatgtgttagtattttttaactgtgacatcataataacctgtttgttcacgatg
gcatagggaaagataatccgcgaatggttttgtgcggaacaatgaatatctctctcctat
tttcggcgcgtacctgcgcctttttctccccgcctctctcgttttccggcgaccgagatg
gcccgcagacgcagggaaccagatcttcaaatcgctctgaagcattatcaagtcaagagt
ggagagatcagatctcatacgcattgttcagatatctccactaggctaacgagtggaaat
atacttagctcacaagtgccggtaacattcttggcctgcgtcaacagaagcagttttaag
tcaattaatatttaatcctgcaagttaataatttattccgacactggaaactttgctgtg
agatgtcagtgagcccaaagcattcgactacaaccccattttcagttaccgatattttga
gtccgctagaagagtcgtacgggaccggttcggttgaaggcattgtcagcggccgcaggg
aatttagcgagctgtacagcaacatggaatccggcgcggcctcgtcggcgggaattcacg
tcccgaatctcggcgggggaggcagcacggggtcgatctcttcccccatgacttcgtacc
gacaaccgatgatgggcacgccgccgcaccattctatacaccatcagcaaatgtcatctg
ccaacccttaccagactgcagcaggaatgaatggaagttataacctgcaccctatgccta
ccccaccgcaaacttcgtttcatgcaatgcctggatctggtggaccgactgggtatggca
acgggggtgttccggagctgccaccgtataataatgtacaatctccatggtacggtgcac
cttcaaatccagacccaagatttggtaagttctccagattatagcttataactaaattct
ttctctaaatacaaatatacttaaacatagagccttcctaaacaaactGGTTAATTTTAC
TTGTACTTTTATAAACTATG
