- Region 'REG00001481'
Cis-regulatory Region
Name
Cirobu.REG.KH2012.C3.6291450-6291999
Short name
n/a
Region ID
REG00001481
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Alicia Madgwick (2019-01-08)
Annotator
Patrick Lemaire (2019-01-08)
Curator
Delphine Dauga (2019-01-17)
6,291,4506,291,999
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [6,291,450 / 6,291,999] on scaffold KhC3
Primer used for cloning : Forward : tgttaattgtttaaaacacgattaga Reverse : acagcgctgtggttcgag
Show sequence
Length: 550
TGTTAATTGTTTAAAACACGATTAGAatatttgggtattgtgtgctaaaggtgtcctatt
tttccctaccctactatacatattttcactttaaaccagaaatttattttgcatcttaaa
attgttctaaatatgaattatttgatcgttgtttctaattaatcccgaacaaagttgcgg
taattgttactgaaagaaatttgcgacaattcctttgtttggtgcgctcactttcgttga
ttgaacaataatagcggtgcaagctttctattgtctcatcctttgtgtctggcaactatc
gtcgtttatagcgttatctggtcggagttcgcaataacgacttttgtctggaacacccgc
ttcaaagtgacgaagacaaaaagaaaatgttattgtttctactttgagataagcagacga
ccactgccggtatataagtcgccgcatctcagggtgggattcattttactcaacaactcg
cagcgggtaaccggaagtgacaagaacgagatctagacttttacctcaagttCTCGAACC
ACAGCGCTGT
