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CIS-REGULATION

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  1. Region 'REG00001033'

Cis-regulatory Region

Name

Cirobu.REG.KH2012.C1.8706624-8708633

Short name

n/a

Region ID

REG00001033

Status

Curated

Origin

natural region from C. robusta formely Ciona int. type A

Type of Activity

regulatory_region
(extended_promoter)

Author

Monia Teresa Russo (2015-08-31)

Annotator

Filomena Ristoratore (2015-08-31)

Curator

Delphine Dauga (2018-01-30)


Description

Overview of functional TF binding sites in this region

8,706,6248,708,633

Motif Name Binding Factor(s) Sequence Position in Region Comment

Sequence

Aniseed Coordinates: [8,706,624 / 8,708,633] on scaffold KhC1

Show sequence

Length: 2,010

ATCCAGCTGGGTATGCTGAAGCAACCGCTATTTGCCAATCACGCTTTTCCGCTTCAGACA
CGACTTTATTGGTTATACGCTAAAATGTTGTTTTACGCCATCAGTACACGCTTTACAATT
TAAAGACAAGCATGCATTGATTTTCCATCGCACAGACATATTGCTTTCCTGGCTGTGTTA
GTTTCTAAACCCTCATTTAAACCTTCTTTTAATAGCCTGAATTAGTTTAGTCTATATAAG
CGTTGTTTATAAGATCACTATTACTTTATTGCAGTCACATTGAGACATCGTTTCTGCTAT
CCGTTTAAGCTAGTCTCGCTGATCGTTTCTTAGCACACAAAGCGATACTACACACTGAAA
ATTCCCACTGGTTAATCGTGCAACGTATAATGGATCACTATATAGTAAGCTGACTGCGGC
TGGAATCTAAACGCTCCTAACTGTTCAGTTTCCTGGCTCGAAAGCCGATCTTCCTATATT
TCCTTCTCTGCCTTTAGAATTACTTCCTTAACAGAAGGCACTCTGTGAAGATAATCTATG
AAACATTGTTCACGAAACTGTTGTCTACGTGACTAACTACGATACCACATTATTACTATC
GGCTTTTCCAAAGGTCTATACAATATCTAGTATGTAGCAGTGCAAATATTTTTGCTGTTT
TGTAGTTTATAGGTTATTTAATGGAACTCTTAAGATTTCTTAAGTCCTGGTTAATTATTA
AACGCAATATAATCTTATCTATTGCGGTATCCTATTTAAAACTAAACAGAATATCAAATA
CATGCTGTACTAACCGATATCCAGTTCCAAGGTTTTTCCTACACATGCGTATTACGTATA
AATTCAAAATATTTCTTGTAAGAAGGTCTGCTTGTAATTAAGACAAAATCATCCCGCGAG
ATGTCGCCAGCGGGTTATTTGTTTTGATACTGACCAGACGAGCCGTGTTGTTTGGAGGTC
TCATTCACTAGCGCATTCAACGTTCGTGTACGATGAGAAGTGCCGTGCTCGCTCAGCTGT
TAAATCGTGTTTTGACGCTCTGTATAAGGTTTTAATACGTTTCGCCGGTCTCTAGTTTAA
GCAACGTTGTTAAGACATAATGCGAAAAACCTACACTGTATATTACGTAGGTAGTAACTA
AACACAATGGATAAATGTGTAGTTATATAAACATTTAGTCAATGTACTGTACGCATACTG
TCATGTGTGTCGGTGGTCAGTTTTTCAGAAAAATTGAACTCTTGATTTTATCGCCGCTAC
AAGTTATTTCTTAGTAGTAAGTTTAATATTGACCGTTTACGGAAGTTTCTCAGGAGTATG
TCTGTGGTTTAAGAGTGACGCGTTTAGCAGTCTATATATAAACTCAGTATAAGTTACCAC
AGGTCTGTGACGCATTACTGTGTAAAATTACGTCATGGATATATTTTCATTGGCGACCAC
GGTATGCGTTTTGTTTGTGACTGGTCAAGTGGTTACGCCACTTCATACGCTAAGTACTGA
GACTGTTTTCTGGTTACTTAACAGATACAAGTATGTCCGTGAGTCCGTGACGATTATCCG
GTGTAAATAAGTTCGTCTGCTGAATCGTGCGTCGATTGTATTCATGCGGAATTACATTTA
CCAACGTTTTAACTGATCGAGCTCTGTAAATTCAGGAGAAATGCGTGACAAGTGTTTAAA
TTTGATGATAATAAATGCCCTGTTATCGCAATACAGGAGAAAATTACGTTTTGTTTAAAA
TCGTAAACTGGTAAAACTTAAACAAGCGTTTCGCAAAGCGGAAAACAAAACGTTGGTAAA
CAAAGCAAAAAGCGTTTCCACACGTATTTCTTTCAATCAAAACGAAATAATAATACTTGT
TTTGTATTCACAGATTTATATGTTTGTTGTACATGTTGGTATAGTTTAAATATCTCTTCT
AACAAGTTCTGTTCCTACGTATTTTTTTTTTGTGACGGACACTTCAAAGCCGTCAAGATG
TCTACGAATTTAACCTACCCTGACCTGCCG