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- Region 'REG00001031'
Cis-regulatory Region
Name
Cirobu.REG.KH2013:KH.C6.1850603-1851424
Short name
Ci-Fz4(-784/+38)
Region ID
REG00001031
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
inactive_region
Author
Fujiwara team (2015-08-31)
Annotator
Shigeki Fujiwara (2015-08-31)
Curator
Delphine Dauga (2018-04-17)
Modification of Cirobu.REG.KH2013:KH.C6.1850412-1851424 by deletion
CONS00001000: pCirobu.REG.KH2013:KH.C6.1850603-1851424>NLSLacZ
1,850,6031,851,424
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [1,850,603 / 1,851,424] on scaffold KhC6
The DNA fragment contains 784-bp 5' upstream region, 5' UTR and 2-bp coding region.
Show sequence
Length: 822
AACAATAGAGATTGTGACGCCACAGATAACAATTGCAGAAACTCGCGACCGCGAATTGCA
TTATCTGATAATCACTTTCTATTATGACGTAACACTTGCAGATCGTAGAGAAAAGAGGAC
GAGCTGGTTCTATTTAAATACAAAGCAAGTCGAAAGTGTTGGCAGCCAGTGTATGAAGTA
AGGATCAACTGTCTTATAGTAGGTTAAGGTAAAATATTCCCATGTTTTTATTCTCTTTTC
TACGGCGCGCGCATTTGCACCAATGCTAAGGATGGGAGCATACAAGTTTAGGTGTGAATA
ACATAATATATGGTGGGGTAAGATGGAACACGTTTTCATTCTCTTATTTCGTCCTATTTG
GTGGTAAACAAAGAATATTTAAGGAACTACATAACCGTATCCTCACCACTGTTAAGATCG
TTGTTATTTGTTAAAAACGCGATTAGGAAATATGAGATATTATGTTCTAACGGTATCCAT
CTACCCGACCTACTACACGTTCTCCAACCCAGTATGCCCTACTACAGTGCGTGAGATGAT
AAGACAGTAGGGCATACACCTGGTAACAGCGGGTGTTTAGTAAAGATCAACCTTTTTCCA
ATGCACGTTGTCTTAGTACAGGTTTATTTAGTTTTGCGTTTAGGAAATTAGTTTGCAAGT
GAAAAGCGCGTTGTTGTTTTAATGTATTTATTTTATCTTACTTTGAATTGAGAAAAGGGT
TATTTGTTGCAGATTTGTGTATATACTTTGTTATGGCATATATTTAAAACTGTGTTTCCT
ACAGGTTGTTTGAGTGCTAAGTAAAATTGTATAATTGGACAT
