- Clone 'citb034p21' >
- Clone 'cien132454' >
- Clone 'cieg023l14' >
- Region 'REG00000204' >
- Region 'REG00001030'
Cis-regulatory Region
Name
Cirobu.REG.KH2013:KH.C6.1850412-1851424
Short name
Ci-Fz4(-975/+38)
Region ID
REG00001030
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Fujiwara team (2015-08-31)
Annotator
Shigeki Fujiwara (2015-08-31)
Curator
Delphine Dauga (2018-04-17)
Modification of Cirobu.REG.KH2013:KH.C6.1850093-1851424 by deletion
CONS00000999: pCirobu.REG.KH2013:KH.C6.1850412-1851424>NLSLacZ
1,850,4121,851,424
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [1,850,412 / 1,851,424] on scaffold KhC6
Show sequence
Length: 1,013
TATCTTCACGGTTCTAACACAGCGTTGTTTATTTCTTAAATCGCGATTGGGGATTATGGG
ATATTATGTGCCAACGGTATCCATGTTACCCAACAGTACTATATTAAATATTTTGATTTG
ATTTTGAGACTTTCTGCAAACTAAAGATTGCTTATCGTTTCCGTTACTTGACGTCATCAT
TTTGTTTCGTAAACAATAGAGATTGTGACGCCACAGATAACAATTGCAGAAACTCGCGAC
CGCGAATTGCATTATCTGATAATCACTTTCTATTATGACGTAACACTTGCAGATCGTAGA
GAAAAGAGGACGAGCTGGTTCTATTTAAATACAAAGCAAGTCGAAAGTGTTGGCAGCCAG
TGTATGAAGTAAGGATCAACTGTCTTATAGTAGGTTAAGGTAAAATATTCCCATGTTTTT
ATTCTCTTTTCTACGGCGCGCGCATTTGCACCAATGCTAAGGATGGGAGCATACAAGTTT
AGGTGTGAATAACATAATATATGGTGGGGTAAGATGGAACACGTTTTCATTCTCTTATTT
CGTCCTATTTGGTGGTAAACAAAGAATATTTAAGGAACTACATAACCGTATCCTCACCAC
TGTTAAGATCGTTGTTATTTGTTAAAAACGCGATTAGGAAATATGAGATATTATGTTCTA
ACGGTATCCATCTACCCGACCTACTACACGTTCTCCAACCCAGTATGCCCTACTACAGTG
CGTGAGATGATAAGACAGTAGGGCATACACCTGGTAACAGCGGGTGTTTAGTAAAGATCA
ACCTTTTTCCAATGCACGTTGTCTTAGTACAGGTTTATTTAGTTTTGCGTTTAGGAAATT
AGTTTGCAAGTGAAAAGCGCGTTGTTGTTTTAATGTATTTATTTTATCTTACTTTGAATT
GAGAAAAGGGTTATTTGTTGCAGATTTGTGTATATACTTTGTTATGGCATATATTTAAAA
CTGTGTTTCCTACAGGTTGTTTGAGTGCTAAGTAAAATTGTATAATTGGACAT
