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- Region 'REG00001024'
Cis-regulatory Region
Name
Cirobu.REG.KH2013:KH.C4.1881731-1882173
Short name
Ci-TgfNA(-399/+44)
Region ID
REG00001024
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Fujiwara team (2015-08-29)
Annotator
Shigeki Fujiwara (2015-08-29)
Curator
Delphine Dauga (2018-04-17)
Modification of Cirobu.REG.KH2013:KH.C4.1881531-1882173 by deletion
CONS00000993: pCirobu.REG.KH2013:KH.C4.1881731-1882173>NLSLacZ
1,881,7311,882,173
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [1,881,731 / 1,882,173] on scaffold KhC4
The regulatory region was obtained from Kyoto individual.
Show sequence
Length: 443
CTAACACTATACATCTTAACCCATAGTAGCATAGCATGGATTTTTATTGTTTCTTGTTCC
CTCCGTGCCGGGAATTGTTATCAGTCAAAACAAACGCAACGAATCGGCCAAAATCTGCTT
GTTCACATGCAAAACTGTCAACACAAAAGTGACAATTACCGAGTTTACACGCATGTAAAA
TTATTGTAAGAAACCCGATAAGGAGACCTACTTTATCGGCCCCTTATCGTGGAGATTTGC
AACACGCTCTAGCGTTTCAGCCGAAAGCTGTAAGCTTGTATAGTGTTATTGCTAATCACT
GTTAGTTGTTGTTGTTGCTGAAAAATGAAGAAGTTATCAGCAAAAAAAGTTGAGTTAGTG
TTGGCAGTTTAATAATACTGAGCCGTTGAAAGTGTTGGGTTAAAGATGCATCGAATACTG
CTAGCTGGTTTGTGTTTATTCGT
