Cis-regulatory Region
Name
Cirobu.REG.KH2013:KH.C4.1881531-1882173
Short name
Ci-TgfNA(-599/+44)
Region ID
REG00001023
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Fujiwara team (2015-08-29)
Annotator
Shigeki Fujiwara (2015-08-29)
Curator
Delphine Dauga (2018-04-17)
Modification of Cirobu.REG.KH2013:KH.C4.1881331-1882173 by deletion
CONS00000992: pCirobu.REG.KH2013:KH.C4.1881531-1882173>NLSLacZ
1,881,5311,882,173
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [1,881,531 / 1,882,173] on scaffold KhC4
The regulatory region was obtained from Kyoto individual.
Show sequence
Length: 643
TACTTTTAGTGCGCGTTACAAAATAGAGTGGGTTAGGGTAAAAATGTTTTTATTTTCGTT
CTCTTTTATCGTTCTATTAATCTATTTGGTAATAAACAAAGAATATTACAGATTTAGTAG
ATTATGGGAAGATGGGACACATTTGCATTCTATTTTCTCGTTCCATTTGGTAGTAAACAA
GGAATATGAGATACTATGCGCTAACACTATACATCTTAACCCATAGTAGCATAGCATGGA
TTTTTATTGTTTCTTGTTCCCTCCGTGCCGGGAATTGTTATCAGTCAAAACAAACGCAAC
GAATCGGCCAAAATCTGCTTGTTCACATGCAAAACTGTCAACACAAAAGTGACAATTACC
GAGTTTACACGCATGTAAAATTATTGTAAGAAACCCGATAAGGAGACCTACTTTATCGGC
CCCTTATCGTGGAGATTTGCAACACGCTCTAGCGTTTCAGCCGAAAGCTGTAAGCTTGTA
TAGTGTTATTGCTAATCACTGTTAGTTGTTGTTGTTGCTGAAAAATGAAGAAGTTATCAG
CAAAAAAAGTTGAGTTAGTGTTGGCAGTTTAATAATACTGAGCCGTTGAAAGTGTTGGGT
TAAAGATGCATCGAATACTGCTAGCTGGTTTGTGTTTATTCGT
