- EST 'FF763070.1' >
- Region 'REG00000649'
Cis-regulatory Region
Name
Ci-TGFbeta -969/71
Short name
n/a
Region ID
REG00000649
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Lionel Christiaen (2010-04-21)
Annotator
Delphine Dauga (2010-04-21)
Curator
Delphine Dauga (2010-04-21)
This region drives strong expression throughout the animal hemisphere from the 32 cell stage
Reference for coordinates : KH transcript model.
1,881,1201,882,159
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [1,881,120 / 1,882,159] on scaffold KhC4
Show sequence
Length: 1,040
GCCACTTTCTGTCAAACATCCGTGTTAGTGAACATAGAACTGTGTTGAAATCATAACAGG
GTCTTAGTCGTTTTGCTGTAAGCGGTGCCGTATTATAGCTTCAAGTATCCTTTGTGCCAA
ACCAATGCTCGTAGGCTTAGTGAGATAAACCCCGGACCAATTCCTGATCCTGACCTAACT
GTAAATCGTTCACAACAAAGATACGACTCGATCGTGGCGAGCAAACTCAGTATCAAAGCG
CCGGTGCTCGAAATTCCAAACGTCTTTGATGTTTCCTAAACATATCGTCGCTGTTTTTCT
CCACGCGTTCTTATAGCGATGACGTAAGTCTTTCCATAAATCATAGCGCAAAAATGGAAA
CGGTTACGTAACTAATACGGATGTGGTATGCACCGTGGAAACATGTTACGTTACTTTTAG
TGCGCGTTACAAAATAGAGTGGGTTAGGGTAAAAATGTTTTTATTTTCGTTCTCTTTTAT
CGTTCTATTAATCTATTTGGTAATAAACAAAGAATATTACAGATTTAGTAGATTATGGGA
AGATGGGACACATTTGCATTCTATTTTCTCGTTCCATTTGGTAGTAAACAAGGAATATGA
GATACTATGCGCTAACACTATACATCTTAACCCATAGTAGCATAGCATGGATTTTTATTG
TTTCTTGTTCCCTCCGTGCCGGGAATTGTTATCAGTCAAAACAAACGCAACGAATCGGCC
AAAATCTGCTTGTTCACATGCAAAACTGTCAACACAAAAGTGACAATTACCGAGTTTACA
CGCATGTAAAATTATTGTAAGAAACCCGATAAGGAGACCTACTTTATCGGCCCCTTATCG
TGGAGATTTGCAACACGCTCTAGCGTTTCAGCCGAAAGCTGTAAGCTTGTATAGTGTTAT
TGCTAATCACTGTTAGTTGTTGTTGTTGCTGAAAAATGAAGAAGTTATCAGCAAAAAAAG
TTGAGTTAGTGTTGGCAGTTTAATAATACTGAGCCGTTGAAAGTGTTGGGTTAAAGATGC
ATCGAATACTGCTAGCTGGT
