- Region 'REG00000596'
Cis-regulatory Region
Name
Ci-glyt-III -975/-47
Short name
n/a
Region ID
REG00000596
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Kusakabe team (2009-12-12)
Annotator
Delphine Dauga (2010-01-18)
Curator
Delphine Dauga (2010-02-24)
Conversion to aniseed format of DBTGR database entry from Kusakabe team.
Transcription start site is based on the start of the first exon of the JGI transcript model.
4,045,3794,046,306
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [4,045,379 / 4,046,306] on scaffold KhC1
Sequence from JGI V1.0
Show sequence
Length: 928
AACTGTAAAGTAAACCAGTGGAAGCTCAAATCACCCGATCTACCTATATATCTGTGTAAC
ATAATTACTGTCACCGATCTGCCATTAGTTTATATTCAACCCGTTCACTGGAAAATGAAA
GAATGCTGTATACGGTAGGGTGGAGGAAGATGGGACACCTTTTCATTTTTACCCTGTCCT
ATTAGGTAGTAAACAAAACATTTAAAGAATTGTAAAATCATTTTCTCACGACTCCCGTAG
ACCGTTGTTAAATGTTTAAACCACGATGAGGATATTTGGAGATAATGTGCTGAAGGTGTC
CCATCTTACCCCAGCACTATATATATATATATATATATATATATCTTTACGGTTAAAATT
ATTCTGGATTTCCAACTTGAAACTTATAGCAGCCTTTTAAGTTACAATAACAACGAATTA
ACCACGTAGTTCGCCTTCGTCCATATTGCAACTTTTCCGCCTTTCTCATTGTATATTTTA
TATAAATGTTGCAGTCGTGTTTCCGTACCATCATGCTAATTTGCTGAAACCTAGTTTTGA
TTTGTAGTTTTTCAAATAATACATTTATAATTAATAGTTTTGTGCGACTGGTTATCCTAT
GTCATTAGCAACGAAGTTTAATGGCGGTTTATTTAACAACGAAAGCCACTGACACCTTCC
TTCATGTTTTCGTCCCGATAATATAACGCTTCAGTGACGTCAGCACACGGGCGAATGTTG
CGGGACTACACGGTTCGCCTGTTTGCAAAAATTCAATGAGACACTGTTCAGTAACTGCTG
TTTTGGGTGAATGCTTCGTTTTGGGAAATAGCCTTTTTCTGCACATGCATGAGTGCGGAA
TTGGGGCGTTAACTATAGACGTGTCCGTGTTGTATTCAGTTCAACGTTGAACACTTCAGA
CGTATATCACTATGGGGGTAAGTTCATA
