- Region 'REG00000509'
Cis-regulatory Region
Name
Creatine kinase -571bp/-114bp
Short name
n/a
Region ID
REG00000509
Status
Not Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Christopher D. Brown (2009-12-10)
Annotator
Clara Degos (2010-07-23)
Curator
Clara Degos (2009-12-10)
Transcription start site is based on the start of the first exon of the KH transcript model.
Construct #1656 in the paper.
Modification of Creatine kinase -592bp/-114bp by deletion
6,3156,770
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment | |
|---|---|---|---|---|---|
| 1 | T-Box | n/a | TGTGCATGT | [-570 / -562] | |
| 2 | T-Box | n/a | TAACTGTGACGAGTT | [-560 / -546] |
Aniseed Coordinates: [6,315 / 6,770] on scaffold KhL10
Transcription start site is based on the start of the first exon of the KH transcript model.
Show sequence
Length: 457
ATGTGCATGTGTAACTGTGACGAGTTGTCCCTTACGATGTATATTCTGACTGTTTGTATT
ACCGCAGTAGTTAATAAAAAAATCAATTAAATACTAAACAGTTTGTTTTTCGCATAAATT
AACAAATTCAGCAAAAATGCTTTGCGATATATACTCTGGCTTCAAATTACCAGCATGTTA
CAAGGTCAAGGCAGTCACTGTAAGTGGCGATTATAGCACAGTCAACGTGCTAACATCGGT
TCGTTCGAGGTTGCAGCTTCATGCAGGCTAATAATGTGACAGCCGCTGCTTTGACAAGAT
CCAGGGGCCAATACAAATCTTTATAAATAGGTAGCAGATATCTGTGCAAGCGACAGTCGA
AGTGGTCTTGGTTAAAGACATTGTTTAGCCTACCATCATAAGCCAGTGTGTCTGAGTGTC
TTTTATAGACGTTTCACGAAATGTAACATATGTATAA
