- Region 'REG00000474'
Cis-regulatory Region
Name
Creatine kinase -2606bp/-114bp
Short name
n/a
Region ID
REG00000474
Status
Not Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Christopher D. Brown (2009-11-19)
Annotator
Clara Degos (2009-12-10)
Curator
Delphine Dauga (2009-12-10)
Transcription start site is based on the start of the first exon of the KH transcript model.
Construct #1576 in the paper.
6,3158,806
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment | |
|---|---|---|---|---|---|
| 1 | T-Box | n/a | tgtgcatgt | [-570 / -562] | |
| 2 | T-Box | n/a | taactgtgacgagtt | [-560 / -546] |
Aniseed Coordinates: [6,315 / 8,806] on scaffold KhL10
Transcription start site is based on the start of the first exon of the KH transcript model.
Show sequence
Length: 2,492
CGCCTTTATCAGAGCATATTAACTGTCTAGTCCAAGGACGCTCACATCAATGAGGACACT
GATACAATGATAGCAGCATGAAGCCTCGAAACCGTATATCATGTGGACTATACAGATTGA
CAGGCGCTTTCACCTTGTGTCACGAGACCAACCATTTTTATACATTTCATTTTATATGTA
TATGCGGACCGTAACAGCATGTGCATACAAAGAACTTATTTATATTGCTATACATTAATA
TATTTTTACACCTTCGTAAACTGTGAACATTATACATGATTAAGATGCAGGATTTGATTT
TTTTACCTTGATGTTTGTCTTGATAGAGTTGTACGTGCAGTAGCATAACTAATAAACAGC
GAAGTAACAACGCAAATTAACATTATATTTTTCATATTGACTAAAAAGCGCTTTCGACAA
TCTAGTCTATGGCAGTATTTAAAATAATATAATGCAAATTTTTGTTAAATTCATTAGACT
AATACATACTATATATGTCATTTAAAAACAGGAATCGTAACTAATCTGCCAGAAACTTTT
TGTTTGGAATACAAAATTAGCATAAATTTAGTGAGGAAGATGGGACATCACTTCATTCTA
TTTTTTCGTTTCATTCAGTAATAAACAAAGAATATTCAAAGAACAAAACCGTATTCTCAC
GACTCCCATATAGACCGTTGTTTTAGTGGTGTAAAACACGATCAGAATATTTGGATATTA
TGTGTCAAAGATGTCCCATCTTCCCCCATCTACAGTATATATCCACGAATTCTTAGTAAA
GGCATTTAGCAGTTGGTCTTGCTTTTGGTGCCAAGTACTATATTATAAGTCTTACACTGT
TTACCATATACACTGTTTACGCTTTATACCAAATTTCCTATATATATTAGCCATGGTTGC
ACTAAACACACTATATAACAAAGCGTTCACTGACCAATCGCACGTATAATGAAGGAATGG
TTTACAAAGCATTGACTATTGCGAGGGATTTCCCAAATCGTTATCAGTTAAATAAATGCG
TAACTTTGAATGTTTTTATATGGACGACAATATGAACAACCCATGAGTTAGGTTAATGAC
CGTTAAGGCCGATTTTGCCCCAAAACACAAACATTTTGTCAGCGGCGTTTACAAAAGTTA
TACCCTTTATAGTTATGCAAATTAAGGTTACTTTCCCATAATATAAGTAATAAATTACGA
TGTAAAAATTTACAAAAAAAAATCGCGAAAGACGTTACTAAAGACTGCAACTAGTTTACT
ACAGTGATTATGTTTATAATGACTAATCGACAATAATTGTTAAATACCGAAACTTTGCAC
AACTGAATACAACTTACACATACGAGCCAATTTTTAGCTGAATTCTAATATCGCCTTATA
ATTTCTATACATATAATTAAAAATGCCGACTTAAACCGCTTATAGTATTTCAGCACCAAG
AGAATTTATTACAGCTGTTTAAAATGGGTTCAGTCATAGAACATTAGTTTTTGGTATATC
TATATTACGCAATACGTGACATAAGTGCTCGTGGTATGAAACTATTCACTACCCTTCGTA
ATGTTGACTATTTTCAATCCTAATACCACTCAATACAGTCATACTTACAATCACAGCACG
TTGTTTGTAGTGTAGACAATTAATAAACACTCAATATGATTTCAAAAAAACAAACGTTCT
GTAAATAGAATTTCAATTTAACCACTGTTGCTACTTGTATGTGTAACTATATAAAACTGC
ATCGCTTTTACGGTATGTAGTAGGGTGGGAGAAAGTGGGACACCTTTAGCGCATAATACC
CAAATAACCTGACCATGTTTCAAACAATTAACAACGGTCTATGGAAGTTGTGAGGATGTA
GTTTCATAATTCTTTTACTTTTCTTTTTTTACTACCAAATGGGACGACAAAGTTAACAGG
AGTCCCATCTTCCCCTACCCTACTGTATATATATTATGACTCTTCGTAATGCCAGCACTT
TACATTAAGTTTAATTTAAACTGCGAAACAGTTTATGGTTTAGGCTTTGAAAAGTGTGTG
CATGTGTAACTGTGACGAGTTGTCCCTTACGATGTATATTCTGACTGTTTGTATTACCGC
AGTAGTTAATAAAAAAATCAATTAAATACTAAACAGTTTGTTTTTCGCATAAATTAACAA
ATTCAGCAAAAATGCTTTGCGATATATACTCTGGCTTCAAATTACCAGCATGTTACAAGG
TCAAGGCAGTCACTGTAAGTGGCGATTATAGCACAGTCAACGTGCTAACATCGGTTCGTT
CGAGGTTGCAGCTTCATGCAGGCTAATAATGTGACAGCCGCTGCTTTGACAAGATCCAGG
GGCCAATACAAATCTTTATAAATAGGTAGCAGATATCTGTGCAAGCGACAGTCGAAGTGG
TCTTGGTTAAAGACATTGTTTAGCCTACCATCATAAGCCAGTGTGTCTGAGTGTCTTTTA
TAGACGTTTCACGAAATGTAACATATGTATAA
