Cis-regulatory Region
Name
Ci-delta2 -1654/68
Short name
n/a
Region ID
REG00000365
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Yukio Ohtsuka (2008-01-02)
Annotator
Émilie Carmona (2008-01-02)
Curator
Delphine Dauga (2010-06-07)
This region is active in part of trunk and in part of epidermis.
31,41233,133
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [31,412 / 33,133] on scaffold KhL50
Sequence from JGI V1.0
Show sequence
Length: 1,722
ATGCGTGTGGCGACAAACTAGTTCTACATCTGCTTAAGTTGGAATATTCGGACCTCATTG
TTTCGCAGCGGAATAGCGGTTTGGGAATTCTAGACAGGAAGCACGAAGTTCAAATGCATC
GATGCTATTATTACGTCACAATACAAATCGTGGCTTAGATAATAAAGATGTCTCGATTTG
TCATAACAGCAGGTTGTTCTTGATATTATGACATCACAATGCCACGCGTCTAGTACGAAC
TTGTGTTCGCTATTGTACAACGTCTGTCGTATGCACTACGGTAGACTTGGTAAGGCGTAT
AATTTTTATTACTCTGTACAAAGATGGCACGCTGTGAGGCGCGTGGGCCGTTTGTTCGGC
AAATTTTACTTCGGTTTTGTTCTAGAAAAACTTCTGCTCCGGCTAGCAGCAGACCCGCGT
TCGCCGCCCGATTTAAATAAACAGATTTCGAAACGCTTGCCCGCTCGTACAGACCTGCTA
CCCGGCATTGTTGGTACTCGCCGCTACCCAACTGTCGCGCTTTATTTTAGTTTGTTTTTA
GTCGCGCGCCTTTCTTACTACAGCTCGTGTTTCGGCCCCGCTACTAATCGCTGCTGAGTA
GTCTGCCACTCTGCGCGGGGCAGGTGTTATCGTGGGCAGTGGAATATTCCCTTAAAGAGC
TGAGTCCCAGTCGCTAGTGGATCATAACACAGTCGGTCCAGTGGCGTGCTCTCTCTATTT
TACTTGGCTGCCATGCAAGTGGTAGACGGAAGGATTAAAGGTTTGTTTGTGTCGATCGCT
TTTAGCTCAGAGATGCATTGAGTCGTAGACTATAGGAGGATTATTACGAAACAATAGCGG
CGCACGACCATGATTATTACGTCAGGATTAACAATTTAAAACGTCGCAAAAAAATCAGCA
AATATATTCAAGCGAGTAGCGTACAATGAGTCAGTGTTGAGATCGCTAACCTAATGTGGG
GTGAGAGAGTGTATTATGTATAAGCAAGTAAATGTTACCGGTATATGACTTTTAGGAGAT
TATGTGAAGTTATATAATATAAAGTAATTGGAATTTTAGTTTCCAATAATTTGATTTCGT
TATCGTATAATACAGCCTGGTGAGGTTCTCACGCCAAAAGCCAAGCCATCCAGCGTATGC
GGCTTGTTTGCCTGGTGTAAACAAATTAATGAAAGGTGCTAGACTATAAGAGACTCAAAT
AAAATGCGGAATGAACTGGTCATTAGAGACAGTTGAGTAGGGCGAATGGGAACGCCTATA
GTTACGTTACGGGCGTATGAGACATGGTATGCAGTGTCGGTGACGTTCACCGGGTTTGTT
AAACTTTCCCACGGTCCAAGTTACCGGTGAGCGCCCACGGCAATCGCTGAGATATTTGTG
TCGATCACTTGCGTAGAAATTGGAAATGATTTACAAACAATTGCATGAGTGATGTGACGG
TTTGTTTTACACAGTAAGGTGCAGTTGGTAGGGCTGTATACATGGGTGGCTTGTAAAGCA
CATTGATATAAGCACCGTGGTAGCGTGTACAATGGTAGCATCGTGTAGTTCTAAAAATGT
AGACAGATTGTTTTTATTGTTACGTCACAATGCAGGCAAGGCGCCGCGAAATCGGATTTT
CATGCGTTTTACGAATTTTTCTCTTTTGTTGCAGGTTTTAACTGCGTTAAAAAAAAACTG
AAACCGATAGATTGTGTTGCAAGGTGATAAAACGTGGTTGGG
