- Region 'REG00000045'
Cis-regulatory Region
Name
Ci-MRLC2 -490/80
Short name
n/a
Region ID
REG00000045
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Kusakabe team (2007-01-21)
Annotator
Delphine Dauga (2010-01-15)
Curator
Delphine Dauga (2010-02-26)
The M2 motifs are necessary for the expression in the muscle cells.
4,042,9534,043,522
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment | |
|---|---|---|---|---|---|
| 1 | n/a | tgtgacgacagca | [4,043,156 / 4,043,168] |
Aniseed Coordinates: [4,042,953 / 4,043,522] on scaffold KhC8
This sequence was found using a blast on the JGI site with the sequence included in the publication, like the sequences of the motifs.
Show sequence
Length: 570
GCAGCAGCACAGCATATTGTAGCATTAATGTGATCAAAATTGGGGTAATGGGCCACGTCT
GGCCTAAATCCCAGGTCCTAACGGACCTCACCCATACAGAATGTGATCAAAAAAGTTTCT
TAATGATCGTTAGTTAACAAAATCCATTTAGCAAGGTGATATTGCTGTTCGTATAAGATT
CTACATATTTTCAATTTCGTCATCGCAAAAGCAGTGTTGGATCGACGCGGGTTGCCTATA
GTACGATTTATAACACTATTTATCTTGACACGTTGCGCTGAACAATGTAGAGACTGATAT
ATGTTGCTTGAGTTTGCGCAACGTGACAAGCGCATCGCCCCTGCATATCAAGAATGTGAC
GACAGCAGTGTTGTCACTTACATCGTTTGTGGGGTATAAAAGGCGAGGCCCGCCTGGTAA
GAAATCATTCCAACTATTTGACTCTTCAGCTTACTTGCTTCTTCAGCTAACCAGACAAGG
AATTCTTAAAATGGTAAGTTGTAACATTCTCATACCGATCAAGAGATAGAGTTTAAAACT
GACTTTGAATTCTTAGGCCGGTGGACGAAA
