- Molecular Tool 'Hox12-mRNA' >
- Transcript 'Cisavi.CG.ENS81.R580...' >
- Transcript 'Phmamm.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S836.g12274.02.t
Possible name(s)
ARMC4; CTNNB1; JUP
Gene model
Location
S836 [43,510 / 52,089]
Amino acid sequence
Length: 784
>Phmamm.CG.MTP2014.S836.g12274.02.p
MAEMMMNQGELPAGGNPKAQVQMWFDSGIQSGATTATPSMISGHSNHDSNYPDTNQVLGD
WQREYTMDEVNHIHDQYVRTRADRVRDVLFPETMMEDGSMHPIPGTQFDPNQATSVQRLA
QPSQMLKKAVVNLINYQDDADVATKAIPELTALLNDDDRVVVQQAAQMVHMLSKKVASRQ
ALMNSPALVSALVRAMQNATDPETQRACTGALHNLSHHRQGLLSIFKSGGIPALVKMLDS
PIESVVFYAITTLHNLLLHQDGAKEAVRLAGGLQKMVGLLSRDNVKFLAIDTDCLQILAY
GNQESKLIILASNGPQELVRIMRTYNYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQAV
GMHLNSPSQRLLQNCLWSLRNLSDAGTKQDHIESLLQTLVHLLSSNDINVVTCSAGILSN
LTCNNMSNKTTVCQVGGIEALVRTVLQAGDREDITEPAVCALRHLTSRHPDAEMAQNSVR
LHYGLPILVKLLHPPSRWPLIKAVVGLIRNLALCTANHGPLREHGAIPRLIQLLMRAQQD
AQRRTSLASSHSQMSSPYVDGVRMEEIVEGTTGSLHIMAREPHSRAVIRSLNTIPLFVQL
LYSQVENIQRVAAGVLCELAQDKDSADIIEAEGACAPLTELLHSKNEGVATYAAAALFRM
SDDKSQDYKKRLSVELTSSLFKDDGALYNVRSYVSNTLVYNSATDTSGYPPPEGQQPMDY
GHPQQHGMGPPAEYPLPELSGMDLDPVVMSGGQQQGQDQLFFLSVLQVHWPNGFKKKTFE
RSSA
Nucleotide sequence
Length: 2,355
>Phmamm.CG.MTP2014.S836.g12274.02.t
ATGGCAGAAATGATGATGAACCAGGGAGAGCTTCCTGCTGGCGGCAATCCCAAAGCACAA
GTGCAGATGTGGTTTGATTCAGGAATCCAATCCGGAGCCACCACTGCTACACCATCTATG
ATCAGTGGCCATAGCAACCATGATTCAAATTATCCGGACACAAACCAGGTGCTCGGAGAC
TGGCAAAGGGAATATACCATGGATGAAGTAAATCATATCCATGATCAATATGTTCGCACT
CGTGCTGACAGAGTCCGTGATGTGCTGTTTCCTGAAACTATGATGGAAGATGGATCGATG
CATCCAATTCCAGGCACCCAATTTGACCCAAATCAGGCCACATCAGTGCAGAGACTGGCT
CAACCATCACAGATGCTCAAAAAAGCTGTTGTAAACTTGATCAATTACCAGGATGATGCT
GATGTTGCAACCAAAGCTATCCCGGAGTTGACTGCCTTGTTGAATGATGATGATCGCGTG
GTTGTACAACAAGCGGCCCAAATGGTTCACATGCTATCAAAGAAAGTGGCCAGCCGACAA
GCTCTCATGAACAGTCCTGCCTTGGTTTCTGCTCTTGTTAGAGCAATGCAGAATGCTACT
GATCCAGAGACCCAGCGTGCTTGCACTGGTGCACTCCACAATCTGTCCCACCATCGTCAA
GGATTGTTGTCAATCTTCAAATCTGGTGGCATTCCAGCTCTTGTGAAAATGCTCGACTCA
CCAATTGAGTCTGTGGTCTTCTATGCCATCACCACACTGCACAATCTTTTGCTCCATCAA
GACGGTGCTAAAGAAGCTGTGCGCTTAGCTGGAGGTCTTCAAAAGATGGTTGGACTCCTT
TCAAGGGACAATGTGAAGTTTCTTGCTATTGATACAGACTGTCTCCAAATTTTGGCATAT
GGCAACCAGGAAAGCAAGCTCATCATCTTGGCAAGCAATGGTCCACAAGAACTTGTGCGC
ATTATGCGAACATACAACTATGAAAAACTGCTTTGGACTACAAGCAGAGTGCTTAAGGTT
TTGTCTGTTTGTTCAAGCAACAAGCCAGCTATTGTGGAAGCAGGTGGTATGCAAGCAGTT
GGCATGCATCTGAACTCTCCATCACAAAGACTTCTTCAGAATTGCTTGTGGAGTTTGAGA
AACTTGTCTGATGCAGGAACAAAACAAGACCACATTGAAAGCCTTCTTCAGACACTTGTG
CATTTGCTTTCATCTAATGACATTAATGTCGTGACATGCTCTGCTGGAATTTTGAGCAAT
TTGACTTGCAACAACATGAGCAACAAAACCACAGTTTGTCAGGTTGGTGGTATTGAGGCA
TTGGTGCGCACAGTGTTGCAAGCTGGAGACAGGGAGGATATTACTGAACCGGCAGTGTGT
GCATTGCGTCACTTGACATCTCGTCATCCGGATGCTGAAATGGCCCAGAACTCAGTTAGA
CTGCACTATGGACTACCAATCTTGGTTAAGCTGCTTCACCCACCATCGAGATGGCCACTT
ATTAAGGCTGTAGTTGGACTGATTCGTAATCTTGCTTTGTGCACTGCCAATCATGGACCT
CTTCGTGAACATGGTGCTATCCCACGATTGATTCAATTGCTAATGAGGGCTCAGCAAGAC
GCTCAACGTCGTACAAGCTTGGCTTCAAGCCATAGCCAAATGTCCAGCCCATATGTGGAT
GGTGTTCGTATGGAGGAAATAGTTGAGGGCACAACTGGCTCTCTTCACATCATGGCTCGT
GAACCACACAGCAGGGCAGTTATCCGAAGTCTTAACACAATCCCATTGTTTGTGCAGCTT
CTCTACTCACAGGTTGAGAATATTCAGCGTGTTGCTGCTGGTGTGTTGTGCGAATTGGCG
CAAGACAAAGACAGTGCTGACATAATCGAAGCAGAGGGTGCTTGTGCTCCTTTGACTGAG
CTTCTTCACTCAAAGAATGAAGGAGTTGCAACATATGCAGCTGCAGCACTATTCCGTATG
TCTGATGACAAGTCACAAGATTACAAGAAGAGACTGTCAGTTGAACTCACAAGCTCTTTG
TTTAAAGATGATGGTGCCCTGTACAACGTAAGAAGTTATGTGTCTAATACATTGGTCTAT
AATTCTGCTACTGATACATCTGGATACCCACCACCAGAGGGTCAACAACCAATGGACTAT
GGACACCCACAACAACATGGTATGGGACCACCAGCTGAGTATCCTTTACCAGAGCTGTCA
GGAATGGATCTTGACCCTGTAGTGATGTCTGGAGGCCAGCAACAAGGACAGGACCAGCTC
TTCTTCCTTAGCGTGTTGCAAGTACATTGGCCTAATGGATTTAAAAAGAAGACTTTTGAA
CGATCATCCGCTTAA
| PRINTS |
Beta-catenin (IPR013284) - T[78-98] 1.6E-101 - T[165-186] 1.6E-101 - T[229-248] 1.6E-101 - T[285-307] 1.6E-101 - T[315-339] 1.6E-101 - T[439-464] 1.6E-101 - T[483-504] 1.6E-101 - T[603-625] 1.6E-101 |
| Gene3D |
ARM-like (IPR011989) - T[127-684] 3.7E-255 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[129-661] 2.8E-82 |
| SMART |
Armadillo (IPR000225) - T[135-174] 96.0 - T[175-217] 0.1 - T[218-258] 7.7E-4 - T[259-300] 4.3 - T[302-343] 9.0 - T[344-384] 0.0047 - T[388-423] 24.0 - T[425-467] 2.7E-5 - T[471-513] 0.0028 - T[514-580] 0.23 - T[581-621] 0.0012 - T[622-662] 0.49 |
| ProSiteProfiles |
Armadillo (IPR000225) - T[145-187] 8.802 - T[187-230] 12.022 - T[229-271] 13.807 - T[313-356] 10.307 - T[394-436] 12.302 - T[436-478] 12.932 - T[483-526] 10.447 - T[592-634] 11.602 |
| Pfam |
Armadillo (IPR000225) - T[225-256] 1.3E-5 - T[345-384] 9.7E-7 - T[428-467] 1.0E-4 - T[583-620] 9.2E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTNB1_HUMAN | 69.892 % | 986 | 0 |
| PLAK_HUMAN | 62.036 % | 867 | 0 |