Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S635.g10778.01.t

Possible name(s)

BBOX1; TMLHE

Gene model

Phmamm.CG.MTP2014.S635.g10778

Location

S635 [37,166 / 41,644]

Sequences

Amino acid sequence

Length: 396

>Phmamm.CG.MTP2014.S635.g10778.01.p
SDKNICKVLWKDGHVSRFHARWLRYNCKCNRCEPPFSGVYTVDVLQLPEELNISEAHISE
NGTELRASYDDDILPKHESRHWASWLRAKCYCAGCLETKINQRDVITRHIKNNASSREIP
TMDYQEIADDSNSGLFKLVNNLVEIGFCRIKKVPSESGMVLKVARKIGCVECSTYGEMFE
VYVKDSENAAYTNLKLPFHQDQPTYECSPGVQLLHAIRFDECVTGGESLLADLFEAIEIL
RKESPQHFKTLTEVPVSYDTIDLNGVAPRYLECQKYHIHLDYFGKIVEVNWHPALNTAPQ
VHEKDVDRYYAAHRALLKIIRRPEIQYRFKMDCGDLIIFNNRRMLHSREAYEANGGIRHL
QGTYVKLDDLKSKYMTLAHQLNIPVVPPKVGNRSSF

Nucleotide sequence

Length: 1,229

>Phmamm.CG.MTP2014.S635.g10778.01.t
ATCGGACAAGAATATTTGTAAGGTTCTTTGGAAGGACGGCCACGTAAGCAGATTTCATGC
AAGGTGGCTTCGTTATAACTGCAAATGCAATAGGTGCGAGCCACCATTTTCAGGCGTGTA
CACAGTGGATGTGCTACAACTTCCAGAAGAGCTAAACATTAGCGAAGCTCATATCTCCGA
AAACGGTACCGAGCTACGTGCAAGTTACGATGATGACATTTTACCCAAACACGAATCGCG
CCATTGGGCCTCTTGGCTTCGCGCCAAGTGCTATTGCGCCGGTTGCCTGGAAACAAAAAT
TAACCAACGTGACGTCATCACTCGTCATATTAAAAATAATGCAAGTAGCAGGGAAATCCC
CACAATGGACTATCAGGAGATTGCGGATGATTCCAACTCCGGATTGTTCAAGCTGGTAAA
CAACCTGGTGGAAATCGGGTTTTGTCGCATCAAAAAAGTCCCATCCGAATCTGGTATGGT
TCTAAAGGTGGCTAGGAAAATTGGTTGTGTTGAATGTTCAACCTACGGCGAGATGTTCGA
AGTTTACGTAAAAGACTCGGAAAACGCAGCCTACACCAATCTAAAGCTGCCTTTCCACCA
AGACCAGCCAACTTACGAATGCTCACCAGGTGTTCAATTGTTGCACGCGATAAGATTCGA
CGAATGCGTCACTGGTGGCGAATCGCTGTTGGCTGATTTGTTCGAAGCGATTGAGATTCT
TCGCAAGGAGTCGCCCCAGCACTTCAAAACCCTTACTGAGGTTCCAGTTTCGTACGATAC
GATCGATCTTAACGGCGTGGCTCCGAGGTATTTAGAATGCCAAAAGTACCACATACATTT
GGACTACTTCGGAAAGATTGTAGAAGTAAACTGGCACCCCGCATTGAACACTGCACCACA
AGTACACGAAAAGGACGTGGACAGATACTACGCAGCTCATCGAGCTCTGCTGAAAATAAT
TCGACGACCCGAAATCCAGTATCGGTTTAAGATGGATTGCGGTGACCTGATAATTTTCAA
CAATCGCCGCATGCTTCATTCTAGGGAAGCATACGAGGCCAATGGAGGAATACGTCATTT
GCAGGGAACGTACGTGAAACTGGACGATTTGAAAAGCAAATACATGACACTTGCTCATCA
ACTAAACATACCTGTTGTACCACCAAAGGTTGGCAACAGATCGTCGTTTTAAAATGCAAT
AAAATCTTTGTTAACGCCGCTTAAAAGAG

InterProScan

Gene3D	GBBH-like_N_sf (IPR038492) - T[1-85] 6.0E-12
Pfam	GBH-like_N (IPR010376) - T[6-78] 5.2E-7
Pfam	TauD/TfdA-like (IPR003819) - T[118-364] 2.5E-34

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BODG_HUMAN	30.809 %	172	9.61E-50
TMLH_HUMAN	27.822 %	122	2.94E-31