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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA230YI13' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S58.g02109.01.t

Possible name(s)

SS18; SS18L1; SS18L2

Gene model

Phmamm.CG.MTP2014.S58.g02109

Location

S58 [217,822 / 218,611]

Sequences

Amino acid sequence

Length: 262

>Phmamm.CG.MTP2014.S58.g02109.01.p
MSVAFVPQNVRNPKMPVNPETIQKLLDENSHLIQCISENQAKGKVQECAQYQQILHRNLV
WLATVADSNQSGSQQSILSGGQPGSKDQMMPPLSSSAETNPVALNATAGQQPVTSTQPNS
YPQSYASSIPPVNMPGNQPQYTSHVQPSQQVKTSAVPTSGNDALPQQSSTAVQQSMEVPT
PQYSLHQQPAMPTNNTYTTQTAPAYPKYPQQVPQQPVSSQPIPYGQMPQQAPPPQMSYQQ
QQPQQQPSYSQPPYNVYPSQHQ

Nucleotide sequence

Length: 789

>Phmamm.CG.MTP2014.S58.g02109.01.t
ATGTCTGTTGCTTTTGTTCCTCAAAATGTTCGAAACCCTAAAATGCCTGTTAACCCTGAA
ACAATCCAGAAACTTCTAGATGAAAACAGCCATCTGATTCAATGCATATCTGAAAACCAA
GCAAAGGGAAAGGTCCAGGAATGTGCCCAGTATCAACAAATCCTTCACAGAAACTTGGTT
TGGTTGGCAACAGTGGCTGATTCAAACCAATCAGGATCACAGCAATCAATTCTTTCTGGT
GGCCAACCAGGTTCAAAAGATCAAATGATGCCCCCTCTGAGCAGCTCTGCAGAAACGAAC
CCTGTTGCCCTAAATGCGACAGCTGGCCAACAGCCTGTTACATCTACACAACCAAACTCT
TACCCGCAATCTTATGCGAGTTCCATTCCACCAGTGAACATGCCCGGTAATCAACCACAA
TATACATCGCATGTTCAACCATCACAACAAGTAAAAACAAGTGCTGTTCCTACAAGTGGA
AACGATGCATTGCCACAGCAATCCTCTACTGCTGTTCAACAGAGTATGGAAGTCCCAACT
CCTCAGTACAGTTTGCACCAGCAGCCAGCTATGCCAACAAATAACACTTATACTACACAA
ACTGCCCCGGCTTATCCAAAATACCCTCAGCAGGTCCCACAACAGCCAGTATCTTCCCAA
CCTATTCCTTATGGACAAATGCCACAGCAAGCACCGCCACCACAAATGTCATACCAACAA
CAACAGCCACAACAACAACCCTCATATTCCCAACCTCCATATAATGTCTATCCTTCACAG
CATCAGTAA

InterProScan

Pfam
SS18_fam (IPR007726) - T[16-74] 6.6E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CREST_HUMAN 65.385 % 104 6.19E-26
S18L2_HUMAN 61.765 % 92.4 3.33E-24
SSXT_HUMAN 58.974 % 95.9 1.01E-22