- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S485.g09305.01.t
Possible name(s)
ARHGAP15; SYDE1; SYDE2
Gene model
Location
S485 [104,114 / 114,140]
Amino acid sequence
Length: 1,366
>Phmamm.CG.MTP2014.S485.g09305.01.p
MAPTINQWDVHETTFKRSQSMPPERRKRRLQQYIPDSTQTRISESSETNDQPNGNAETKG
VEIRRNKNGFKGMSFRGRKTDVRVSTINPDQLFITNEMKSMLQNGGKPPLQNGSMSHANG
VVTKPQTPVNRTKHSKGNGLVKMLQGGVRRISSLSEKHGPSTILTKTIEIDRSKDGSLGI
FIKKRKVPKQFDNGAAKQGIFVSRLDTSCKVSRENLLHVGDQILSINNVDIVDQDVKMVA
GMMCLPNNLVLKVRSSHKSTSRPKNYQVIKNPQLQRIVEGKSSDVDKVALPNSNHNVVVA
EPSNKTATLNSMYDNDRVDLSLPVKNKKPNNNLARNSVQIRFDESFQILLDAIADCEKPK
NVNNNNCSSEVIHNSKGVDDANFQSDLLSSTTAQSEDIPEDCNSLVNDILSTINGQGTPT
ELKTNPGHPDVDNYSSSNGLRNVPTTSDSNSAHFHTTMKLIDDPDYDEVPTTDDESSYSC
NDEVNVDAFGDHIKYSRKYGQHEKNPSTSTSSSSLNSQGVETVSHHTHMKGHNPDLTRSL
SDAGWQSSADSVIHQQPCCKKASMPRFPVAHTDFTTRECSCMSRQSSNSINSITVDKKRQ
WLESGPQVSDELQMRLDGLHHSTKEGKLKELPPRKVSVTSQKNGDLKKRNSCKRRPSESS
SSSSGHSSNSPGIPRSHKSSLDSPSSVSDFTFHRKNSIKNPMEKSAKSMLSVSSPSSPSP
KTFIYSDKSENDSECSVPHPKAEDSGITATEKVPQTTKVSHPTLLVNGSPEEPGNSNTSN
RSFTAVKITSPSRSRKKNWGKKFTKKFKLGGSSENSMSEYACWMGEDEQQKVEGNLLADS
SKAHQRRLSRQLEWDNVLPDPSIKALTLSQFKKYKPVSALHHQFLPAIDGCLVITLYGVR
ELKKTLCEAYCLVQVDNATTKRIGTTMQTCRGAVAWNQCFELMVNKARDLHVTLYTWETR
GGKHKVCSYATLNLPTLIQGAKLQSNFSERLAVRLEPRGTLYMKVALEKNPSSPGPLVFG
ADLQSIVDRESSGYGIPSLVHSCIEEVEKRGMQVVGIYRLCGSAIVKRELRRKVEEAKGV
TLLTSDNYPDVNVITVTPYRVLMTPLIALLLGILKDFLRELPQPLFPPELLEAVTTAMEK
NPGPTPATVVKEPFAPDPTLTTSIPGSQPATEEEQKRRTSALLQHIKVLSAAPAERATLY
ALLNHLKKVAMHHEQNKMTCQNLAVCFGPVLLGPVNASLGNGIDLSAAIGFKRHIQVLNY
MLSNWPSEPVAVPRAPSPETNDTAENRNSVNRMSCVSLTRRLSRVFIVDESEALKDDAAL
PSNCTDKRGTLISMGRSESLTSILETSDQFEDPQLDLRRMQESEDL
Nucleotide sequence
Length: 4,101
>Phmamm.CG.MTP2014.S485.g09305.01.t
ATGGCACCTACTATAAATCAATGGGATGTACATGAAACTACATTTAAAAGATCGCAGTCT
ATGCCACCTGAACGCCGCAAAAGACGTCTCCAACAGTATATACCTGATTCTACACAGACT
CGGATATCTGAATCCTCTGAAACAAATGATCAACCAAATGGAAATGCTGAAACAAAAGGA
GTGGAGATTAGAAGAAATAAAAACGGGTTCAAAGGAATGTCATTCAGAGGCCGAAAGACT
GATGTTCGAGTTAGTACAATTAACCCTGATCAGCTTTTCATCACAAATGAAATGAAATCA
ATGCTGCAAAATGGAGGAAAACCACCTTTGCAAAATGGGTCAATGTCACATGCAAATGGT
GTCGTAACTAAACCACAGACACCAGTCAACAGAACAAAGCACTCAAAAGGCAATGGACTT
GTTAAAATGCTACAAGGAGGTGTTCGACGTATTAGCAGTCTATCAGAAAAACATGGCCCT
TCCACGATCCTTACAAAAACTATAGAAATAGATCGAAGCAAAGATGGAAGTTTAGGAATC
TTTATCAAGAAGCGCAAAGTTCCAAAACAGTTTGATAATGGTGCTGCAAAACAGGGAATA
TTTGTAAGTCGCCTTGATACATCATGTAAAGTGTCAAGGGAAAATCTTTTGCATGTGGGC
GATCAAATATTGTCAATCAACAATGTTGACATCGTAGACCAGGATGTTAAGATGGTTGCT
GGGATGATGTGCTTACCCAATAATCTTGTTCTGAAAGTCCGTTCCTCGCACAAGTCTACC
AGTCGCCCTAAGAACTACCAAGTAATTAAAAATCCCCAACTGCAACGTATTGTGGAAGGA
AAATCAAGTGATGTTGACAAAGTGGCTTTACCGAATTCAAATCACAATGTTGTTGTTGCT
GAACCAAGTAACAAAACTGCAACACTGAATAGCATGTATGACAATGATAGAGTGGACTTA
TCTTTGCCTGTCAAAAATAAGAAGCCAAACAACAATCTAGCACGAAATTCAGTCCAGATA
AGGTTTGATGAATCCTTCCAAATTTTACTTGATGCAATTGCAGACTGTGAAAAACCAAAA
AATGTAAACAACAACAACTGTAGTAGTGAAGTTATTCACAACTCAAAGGGTGTTGACGAT
GCAAACTTTCAAAGTGATTTGCTTTCGTCAACCACAGCACAGTCAGAAGATATTCCAGAG
GACTGTAATAGTTTGGTGAATGACATTTTAAGCACCATAAACGGCCAGGGGACACCTACA
GAATTAAAAACAAATCCAGGTCACCCTGATGTTGACAATTATTCCAGCAGTAATGGATTA
AGAAATGTCCCAACCACTTCAGATAGCAACAGTGCTCATTTTCACACCACCATGAAACTA
ATAGATGACCCGGACTATGACGAAGTTCCCACTACGGATGATGAATCCTCATACAGCTGC
AATGACGAAGTAAATGTTGATGCATTTGGTGATCATATAAAGTATTCACGCAAATACGGA
CAACATGAGAAGAATCCAAGTACATCAACTTCATCATCATCCCTGAACTCTCAAGGGGTT
GAAACAGTTTCTCACCACACACATATGAAGGGTCATAACCCTGACCTTACCAGGTCACTC
TCAGATGCTGGCTGGCAATCGTCAGCAGACAGTGTCATACACCAACAACCATGCTGCAAA
AAAGCATCCATGCCACGCTTTCCTGTTGCCCACACTGACTTTACAACACGAGAGTGCAGT
TGCATGTCTCGACAGTCCAGCAATTCAATTAACAGTATTACAGTTGACAAAAAGCGACAA
TGGCTGGAATCAGGGCCGCAAGTTTCTGATGAGTTACAAATGCGACTGGATGGACTGCAT
CACTCGACAAAAGAAGGAAAACTAAAAGAATTGCCCCCTCGAAAAGTCAGTGTCACCTCG
CAAAAGAATGGAGATTTAAAGAAAAGAAACAGCTGCAAGCGTCGACCTTCGGAGTCGTCA
AGTAGCAGCAGTGGACATTCCTCCAACTCTCCTGGAATCCCACGATCCCACAAAAGTTCT
CTGGACAGCCCAAGCTCTGTCAGTGATTTCACATTTCACAGAAAAAACAGCATAAAAAAT
CCCATGGAGAAATCTGCTAAAAGCATGCTGTCAGTTAGCTCTCCATCTTCGCCAAGCCCT
AAGACATTTATCTACAGTGATAAATCCGAGAATGATTCTGAATGCTCAGTACCACACCCC
AAGGCAGAGGACTCTGGCATTACAGCGACAGAAAAAGTTCCACAAACAACCAAGGTTTCC
CATCCTACTTTGTTGGTCAATGGAAGTCCGGAAGAACCAGGTAACTCCAATACCAGCAAC
AGGTCCTTTACCGCAGTGAAAATAACCTCACCATCACGATCAAGGAAAAAGAATTGGGGC
AAAAAATTTACAAAGAAATTCAAACTTGGGGGTAGTTCTGAAAATTCGATGAGTGAATAT
GCATGCTGGATGGGGGAAGATGAACAACAGAAGGTTGAAGGCAATTTACTTGCAGACAGC
TCCAAGGCACACCAGAGAAGATTAAGTAGACAGTTGGAATGGGATAACGTTTTGCCAGAT
CCATCAATCAAGGCACTCACACTGTCCCAGTTTAAAAAATACAAACCTGTATCTGCTCTC
CACCATCAGTTTTTGCCTGCTATCGATGGCTGTCTTGTAATAACACTGTACGGGGTACGG
GAACTTAAAAAGACCTTGTGTGAGGCCTACTGCCTTGTACAAGTGGACAATGCCACAACA
AAGCGAATCGGAACCACAATGCAAACCTGCCGTGGCGCTGTGGCATGGAACCAGTGCTTT
GAGCTGATGGTCAACAAGGCCAGGGATTTACACGTCACACTTTACACATGGGAAACAAGA
GGTGGCAAGCACAAAGTTTGCTCATATGCCACTCTTAATCTCCCAACACTAATCCAAGGT
GCCAAACTTCAATCCAACTTTTCTGAGCGACTTGCAGTGAGACTGGAACCTCGTGGCACA
TTGTACATGAAGGTTGCGCTGGAAAAGAATCCATCTAGCCCCGGGCCACTAGTTTTTGGT
GCTGACCTTCAAAGCATTGTAGACCGTGAAAGTTCTGGATATGGCATTCCTTCATTAGTG
CATTCTTGCATAGAAGAAGTGGAAAAACGTGGAATGCAGGTGGTGGGCATATATCGACTA
TGTGGTTCCGCAATTGTAAAGAGGGAGCTTCGACGAAAGGTTGAAGAGGCCAAGGGTGTA
ACTCTGCTTACCTCTGACAACTACCCTGATGTGAATGTCATAACAGTTACTCCGTACAGA
GTTTTAATGACTCCCCTTATTGCCTTGCTTCTAGGAATTCTCAAGGATTTCTTGAGGGAA
CTGCCTCAACCACTGTTCCCACCAGAACTGCTCGAAGCTGTCACTACAGCTATGGAGAAA
AATCCAGGTCCCACCCCAGCAACCGTCGTCAAGGAACCATTTGCACCCGACCCCACCCTC
ACTACGTCGATACCTGGGTCTCAACCTGCTACCGAAGAAGAACAAAAAAGGCGAACAAGT
GCCTTGCTGCAGCACATCAAAGTGTTGTCAGCCGCACCTGCGGAACGAGCAACTTTATAC
GCGCTTCTCAACCATTTGAAGAAGGTTGCAATGCACCATGAACAAAACAAGATGACTTGT
CAGAATTTGGCAGTGTGTTTTGGTCCGGTTTTACTTGGACCTGTCAATGCAAGCCTTGGC
AATGGAATCGACCTCAGCGCTGCTATCGGCTTCAAGAGACACATTCAAGTGTTGAATTAC
ATGCTTTCAAACTGGCCAAGTGAGCCGGTTGCTGTTCCTAGAGCTCCGTCACCCGAAACT
AATGATACTGCAGAAAATCGAAACTCCGTAAATCGGATGAGCTGTGTGAGCCTCACGCGA
CGTTTAAGCCGGGTGTTTATCGTGGATGAGAGCGAGGCTCTTAAAGATGATGCCGCGTTG
CCTAGTAACTGCACCGACAAACGAGGGACTCTGATCAGCATGGGACGGAGCGAGTCATTG
ACCAGTATACTGGAAACATCCGACCAGTTTGAAGATCCTCAACTCGATTTACGTAGGATG
CAAGAATCAGAAGACTTGTGA
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[164-257] 4.43E-10 |
| ProSiteProfiles |
PDZ (IPR001478) - T[167-231] 12.164 |
| Pfam |
PDZ (IPR001478) - T[168-239] 6.7E-7 |
| SMART |
PDZ (IPR001478) - T[176-257] 4.8E-5 |
| Gene3D |
C2_domain_sf (IPR035892) - T[889-1014] 1.6E-8 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[1016-1266] 3.14E-35 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[1021-1269] 33.624 |
| SMART |
RhoGAP_dom (IPR000198) - T[1034-1266] 2.5E-40 |
| Pfam |
RhoGAP_dom (IPR000198) - T[1037-1234] 5.0E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BCR_HUMAN | 25.99 % | 102 | 1.21E-21 |
| SYDE2_HUMAN | 36.385 % | 257 | 6.49E-70 |
| SYDE1_HUMAN | 36.641 % | 215 | 3.64E-58 |
