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  1. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S4009.g18159.01.t

Possible name(s)

COL5A1; ITLN1; ITLN2

Location

S4009 [3,437 / 8,329]

Sequences

Amino acid sequence

Length: 311

>Phmamm.CG.MTP2014.S4009.g18159.01.p
MKKLIKTTPHTTFNTTESVTIKPPLGTFPNPAPSCVELRDAGFKDGIYVIQPSFKSFEVY
CDMIAAGGGWILAATINDNDLSLDESYSDLWFAKSSNNNENIMVFYPDVKSMLDRLEAKY
TEITNLVTDFYTYSYGIHPSRLEDIDLFGNDYGMEIYFNPNQNCYPYEYETNCPDDYIDY
GLDFGKYDVLIPETEINAVMYKILEIISETDSFCPDCVYDDVLSVPVQFSIGNDLVVNSM
LPPSVKPLPTGFVQFRAYGRHGSVYAMCPAVNAITASASLFGNKVFLRKVCIIFSVDKNH
FAFERLMEIAG

Nucleotide sequence

Length: 936

>Phmamm.CG.MTP2014.S4009.g18159.01.t
ATGAAGAAATTAATCAAAACAACTCCACATACTACCTTCAACACAACTGAATCAGTGACA
ATAAAACCACCGCTTGGTACTTTCCCGAACCCTGCCCCTTCATGTGTTGAACTGAGAGAC
GCTGGATTTAAAGATGGAATCTACGTCATCCAACCGTCCTTCAAATCGTTTGAGGTTTAC
TGTGACATGATAGCTGCTGGTGGTGGATGGATTCTCGCGGCCACAATTAACGACAATGAT
TTAAGTTTAGATGAAAGTTATAGTGATTTGTGGTTTGCTAAGTCGTCAAATAACAACGAA
AATATTATGGTTTTTTATCCCGATGTGAAGTCAATGTTGGATCGACTTGAGGCAAAATAT
ACAGAAATCACAAATTTAGTTACTGATTTCTATACTTACAGCTATGGCATTCACCCTTCC
CGGCTAGAGGATATTGATTTGTTCGGAAACGATTACGGAATGGAGATTTACTTCAATCCA
AATCAAAATTGTTATCCATACGAATATGAAACAAATTGTCCAGATGATTATATAGATTAT
GGTTTGGATTTCGGAAAATATGATGTTTTAATACCTGAAACAGAGATCAACGCTGTTATG
TACAAAATATTGGAAATTATATCAGAAACTGACAGCTTCTGCCCGGATTGCGTTTATGAT
GACGTACTTTCAGTACCAGTTCAGTTTTCCATCGGAAACGATTTAGTGGTTAACTCGATG
CTGCCACCAAGTGTAAAACCACTACCGACCGGCTTTGTTCAGTTTCGTGCTTATGGCAGA
CACGGAAGCGTCTATGCAATGTGTCCTGCTGTCAATGCTATCACTGCAAGTGCAAGTCTT
TTTGGAAATAAGGTGTTCCTTAGAAAAGTTTGCATCATTTTCAGTGTTGACAAGAACCAT
TTTGCCTTTGAGAGACTCATGGAAATTGCTGGCTGA

InterProScan

Gene3D
Fibrinogen_a/b/g_C_1 (IPR014716) - T[3-89] 1.7E-6
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[28-90] 3.14E-9
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[44-80] 1.4E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value