- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S354.g07705.01.t
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
S354 [85,255 / 98,434]
Amino acid sequence
Length: 785
>Phmamm.CG.MTP2014.S354.g07705.01.p
MCWHPACFSCTVCQELLVDLFYFYQEGNLYCGRHHAETLKPRCSACDEIIFSDECTEAEG
RHWHMDHFCCFECDTVLGGQRYIMRDGKPNCTQCFEALYAEYCDMCGDLIGLDAGQMQYE
GQHWHATDKCFCCHRCRKSLLGRPFLPKSGRIFCSKSCSLGEDPCHSESDSQHSSSQYET
AQTPKSHNVRHSLNLENLAQRQSIGDSNVFMELDNCSPLANTETEHMRYADPAHPYLAVG
ASPIGNSPTTVATPRKSNASSTEDAVMSPSSTVSSRTKNGVPFPQGQNTYNSTDSSGYNS
SSTLDAIEHQNSMKMNAGAAFHPNMYRPSSNAKVTRLDKETEDGGHVPATEFVPFQMNAH
MRSSPPIISGARKMSPEMQKTIDAFDNLSTSESQPPIKVGSALGNSSAPIPAPRARYPVS
HVPVPRKQSLDSENPWMRKTDLHESQRTSPPRESPKSAVQRKGSERISHKNRCRDPINSF
ELSPSDEGKIFATTNQEDKDDVNSLQSDLDKPGKELKSILKKTHSGTRHCHAPLFGSMDR
LDSFSKKVESDDEDDATGFGDARNDFSSFQRGKRLSASARMHPSEQGDQAKEKSQPRARF
QDNSMALGRTHSALNLDEMNDAFLRFGGPKQKTCSKANCTSKTCSKKLKRTRSTDFAFER
PPPGASRKSRKHRRFIEDEEDDGWCSTCTSSSDDSDYERWDRYDVGNKTPQSPNSMARRL
SAPNNSVRVNVTKPRHSHPFLGEGAEFNAGFLTQSTHRPGMPRNYSTASHMRYRRKQGKK
HCIVM
Nucleotide sequence
Length: 4,207
>Phmamm.CG.MTP2014.S354.g07705.01.t
GGTGTGTAGTGTGCAGTATCGTAACGGCACAATCAGCACACAGGAATAAACTTATGTCTA
GAATGCGATAAGGCAGGGGAGAATAGACATAAGTTCCGCCGGCAACCTGTGATCGAATCG
CCGCAGGGAAATGTTATCTCGGACCGGATCGTAAACCGGCCTTTTCTAAATGTGTCTTGA
CTTTCAGGGACAACTAAGTGATCTAGTCACAGTATGTGTATGAGTTTAAACTACTACCTT
GCTGAGACAAGCAAAGCTTTCGCTAACTGATTCAGTTGGAAAAGTCATTGCATCTTGTGT
GCTTCAGGAAATCGTGCGTTCATTGCAAGTGTTCAGTTCCAAGACACATCGCTCATCCAT
TGGAGTACGTTACTGACTCGCAACGTCACAACAGCAGCAGTGAGACCGACGTCAATATGC
CAGCCGCAATTGAACCAGCCAGAAATCAAACTCAGATGAACAATATCAAATCGATGGAAG
TCGAGAAATTGCCCCCACTACCAACTCACCGCACTAATGGAAACGATAACCGACCAAGAA
GGCGTCAACCCCGGCGCCAGCCCCGCCACGTTCGGGGTTCTGACTCAGAAGAAGAAGCCG
CCGTTGATAACAGATCCTCTTCGCTGCAAGAATATGCCTGGGTTCCACCAGATTTAACAC
CAGAGCAGGTTCGCTTCTATTTCAAAAACCTACCAGAGGAAAAGGTGCCATTGGTTGACA
GCATTGGTGACAAATATCGAGTCCGACAATTGCTGCATCAGCTTCCTCCTCACGACGACA
AGGTATGTTACTGTAACGGTCTCTCTGAAGAGGAGAAGCGGGAACTGAAATTGTTCAGCG
ACCAACGGAAACGAGACTTCCTCGGCTGTGGAAAAGTCAGAGCACTTCCCTTAAATTATC
CTGGCACCCCATGCTCCAAGGTACGTTACGATGCAAGAGAAAAGTGAAAACTTAAAAAGA
ATCAAAATCATCACGTAGCAACCTCTTTTTACAGTGCGGATCCCTTGTGGAAGGTGGAGA
TATTGTGGTAGTCGCAGCTCGTGCTGAAGCTGGAATGTGCTGGCACCCGGCTTGTTTCTC
CTGTACCGTTTGCCAAGAGCTTCTCGTCGACCTCTTCTACTTTTACCAGGAAGGAAACTT
GTACTGCGGGCGCCACCACGCGGAAACCCTTAAACCTAGGTGTTCAGCGTGTGACGAGAT
TATTTTCTCCGACGAATGCACTGAGGCTGAGGGCAGACACTGGCACATGGACCACTTCTG
TTGCTTCGAGTGTGACACGGTCCTCGGCGGTCAGCGCTACATCATGCGCGACGGCAAGCC
TAACTGTACGCAATGCTTCGAAGCTCTTTATGCCGAATACTGCGACATGTGTGGAGACCT
AATTGGCTTGGATGCGGGTCAAATGCAGTACGAGGGTCAGCATTGGCATGCAACTGACAA
GTGCTTCTGTTGCCATCGTTGCCGCAAGTCATTACTTGGAAGACCTTTCCTGCCTAAAAG
CGGTCGAATTTTCTGTTCCAAGTCTTGCAGTCTCGGAGAGGATCCCTGTCACTCGGAATC
CGACTCACAGCATAGTTCGTCGCAGTACGAGACCGCTCAAACGCCCAAATCTCACAATGT
GCGCCACAGCCTCAACCTCGAAAACCTTGCTCAGCGGCAATCCATCGGAGACTCCAATGT
TTTCATGGAACTTGACAACTGTTCACCATTAGCAAATACCGAAACCGAACACATGCGTTA
CGCCGACCCCGCCCATCCCTACCTTGCCGTCGGGGCTTCACCAATCGGGAATTCGCCCAC
TACAGTGGCCACACCCCGCAAATCCAACGCTTCGAGCACAGAAGACGCAGTCATGTCGCC
GAGTAGCACGGTTTCGTCGCGAACCAAAAACGGTGTACCTTTTCCGCAAGGACAGAACAC
GTACAACAGCACGGACAGTAGCGGCTACAACAGCAGTAGCACTTTGGACGCCATTGAACA
TCAAAATAGCATGAAGATGAACGCCGGTGCCGCTTTTCATCCCAATATGTACCGCCCCTC
TTCAAATGCTAAGGTAACGCGCCTCGACAAGGAGACCGAGGATGGTGGTCACGTGCCTGC
CACAGAGTTTGTGCCGTTCCAGATGAATGCACACATGCGCAGCTCGCCGCCTATCATATC
TGGTGCGCGAAAGATGTCTCCTGAAATGCAGAAGACCATTGATGCGTTCGACAACCTATC
AACGAGTGAGTCCCAACCTCCGATCAAGGTCGGATCAGCACTGGGAAACTCTTCTGCCCC
TATTCCGGCGCCCAGAGCCCGCTACCCCGTCTCACATGTCCCGGTCCCGAGAAAACAGTC
GCTAGATTCTGAAAATCCCTGGATGCGGAAAACAGACCTCCACGAGAGCCAGCGCACTTC
TCCCCCACGAGAAAGTCCCAAATCTGCCGTGCAAAGAAAGGGAAGTGAAAGAATCAGCCA
CAAAAATCGCTGCCGAGACCCAATTAACTCGTTTGAACTCTCCCCATCCGATGAAGGAAA
AATTTTTGCTACTACAAACCAAGAAGACAAAGATGACGTCAACTCACTGCAATCAGATCT
TGACAAACCGGGCAAAGAACTAAAAAGCATTTTAAAGAAAACTCATTCAGGCACCCGACA
CTGCCACGCTCCTCTATTCGGTTCAATGGACAGACTCGATTCTTTTTCCAAAAAAGTCGA
GTCCGATGACGAAGATGACGCCACGGGTTTCGGCGACGCCCGCAACGATTTTTCCAGCTT
TCAACGTGGAAAGAGACTCTCCGCAAGCGCACGTATGCATCCCTCGGAACAAGGCGACCA
AGCCAAAGAAAAATCGCAGCCTAGAGCACGATTCCAAGACAATTCTATGGCCCTCGGCCG
AACTCACAGCGCTCTCAACCTTGATGAGATGAACGATGCCTTTCTACGGTTTGGTGGCCC
CAAGCAGAAGACGTGCAGCAAAGCTAATTGCACCAGCAAAACCTGCAGTAAGAAGTTAAA
GCGAACACGCTCTACGGACTTTGCCTTTGAACGTCCCCCTCCCGGTGCGTCCAGAAAGAG
CAGGAAACATCGGAGGTTTATTGAAGACGAGGAGGATGACGGATGGTGCTCGACTTGCAC
GTCATCAAGTGACGACAGCGATTACGAGCGATGGGACCGATATGACGTCGGGAACAAAAC
ACCACAGAGCCCCAACAGCATGGCGAGGCGACTCTCAGCGCCCAACAACAGTGTCCGCGT
AAACGTAACCAAACCCCGTCACTCCCACCCTTTCCTCGGTGAGGGAGCCGAATTCAATGC
CGGTTTTCTCACGCAATCGACGCATCGTCCCGGTATGCCCCGAAACTACTCCACCGCGTC
CCATATGCGATACAGACGGAAACAAGGGAAGAAGCATTGTATAGTGATGTGATCGCTCAT
AGATCTGTCCATGACGTCAACCCCAGCATCATAAGTTCCTTATTTCGTTACTGGCCTCCG
GCCTCTGTCGTTGCCCGCCGCGTACACCAACAAACAGCCTCATCTCTGTACAATATACCA
ACTTACGACCGACTGATCTATAGCGGGCGACACTGTGCACACTCATCACAATGCGCTTTG
GCAGCAAATTAACTTATTCTGCTCGCTGCCGATCGCACATTTGTGTGACTTCCACACAAA
TCATCTGCCTGGATCATCTCGTTTTCATTATCCACCACCGCCACGTTTTGTGTGGAGTTT
TGAGTAAAAAATCGCCTTTGCTCCACTTTTGTTTGACAGTCGTTTTTCGCTTTTATCTTT
GCATGTTTTCTTCACTTGATAGCCATGACTTTTTGGCGCTAGTTTTATCTCTCAAAGTCC
GAATTTCTATTTTGAGTATTTGGCGTCTAAAGTAAGTCAGCTCAACCAAACAATACGTAT
GTTGGCTGCTGTATGGCAATTTTTCATTCATTTTACCCGATTTTTCATTTGGCATTCCCC
GTACGACCACTATCAGCGTGTTTGCTATTGTCAGATTCCATGTTTTTTTCTATCTTGCAG
CGTTTTCATCAACCTTTTTTGTTTTAGTTTTTCTTTATTTTGTAAAAATCAGTTTTGAAG
ATTATATTTGCGTGCATTGTTTTCTGTTCAAAAGCTTTGCATATTCGCTCGCGACTGACC
AATCAGAATTGTCGCATGTCACGTGTTCACCGTTGATACAAAGCCTGAAACGATAAATAA
AATCTCT
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[1-40] 7.643 - T[41-101] 12.91 - T[102-165] 6.435 |
| SMART |
Znf_LIM (IPR001781) - T[1-34] 0.056 - T[42-94] 8.3E-14 - T[102-157] 4.4E-5 |
| Pfam |
Znf_LIM (IPR001781) - T[2-37] 6.5E-7 - T[43-97] 4.0E-10 - T[103-156] 3.8E-5 |
| CDD |
LIM2_prickle (IPR033726) - T[41-96] 7.5614E-38 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[43-77] . |
| CDD |
LIM3_prickle (IPR033727) - T[101-159] 5.34095E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 70.968 % | 313 | 2.36E-94 |
| PRIC1_HUMAN | 71.186 % | 293 | 2.29E-87 |
| PRIC3_HUMAN | 73.62 % | 288 | 1.81E-87 |
