- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S3249.g17586.01.t
Possible name(s)
ZFP62; ZNF227; ZNF235
Gene model
Location
S3249 [3,023 / 7,111]
Amino acid sequence
Length: 266
>Phmamm.CG.MTP2014.S3249.g17586.01.p
TMDKSKKELPFQCKTCGRRFKTSKYLQMHDSRMHDSSKKIHRCKICEKGFVTLRTLKLHT
ASHNGDKQFKCDFCEKRFVHLGNAKTHMLIHSEEKPHRCDVCEKQYRTSQELKCHARTHT
DVKSHRCDMCEKQFSAMVYLKRHLLSHTGEKPYKCKFCEKRFSFNGNALRHMSMHTGEKR
HICEVCEKPFRTSTDLRQHMVVHSDEKPHKCQFCEKSFNLLNNAKRHMKLHTNKKTYRCN
VCEKVFKTARGLKRHIVLHANKKPFR
Nucleotide sequence
Length: 1,241
>Phmamm.CG.MTP2014.S3249.g17586.01.t
GTCCTGTGTTTGTCAATGTCCAGGAAACGCCTTATTTTCCGATGTGGTTCGAGTTCGTGA
CCAATTCACCAAATGCGAAAATACTTTTTATCATAGACCATTTCCGTTATTTTACATTTT
ATTTGAGCGATGATTGTGCGAACTGACATAATCCAACAGCTGCGCAGTAATGAGGCGATC
AAAGTGCGACAAAGTTGAAAGCACAATTAGTGGACAGGTGGTAAACGCGTATTTTAAACA
TCAAATAAGACTATTGTTGGCAATCGTATGGTGCTGTTTCTGACCATTAATGAGATAAAA
GCGTTACATAATTTTTGTTCGTTGTGCCGTAACGCAGATTGTTTAATTGAAATACACAGT
ATTGCAATCACGTTAATCTGGGTGAACAGCCAAGTGTTGTTTGAAGTTCCAAGCTTTCCA
AAATCTTTTTCGCAAATCTCTCACCGAAAAGGTTTCTTGTTTGCATGTAAAACGATATGA
CGTTTCAATCCTCTTGCTGTTTTGAACACTTTCTCGCAAACATTACATCTGTAGGTCTTC
TTGTTGGTGTGGAGTTTCATGTGTCTTTTTGCGTTGTTTAGGAGGTTGAAACTTTTCTCG
CAAAATTGACATTTGTGAGGTTTCTCATCTGAATGCACAACCATGTGTTGCCTCAAATCG
GTAGAAGTCCGAAATGGTTTTTCACAAACTTCGCAGATATGCCGTTTTTCGCCAGTGTGC
ATCGACATATGTCTTAAAGCATTGCCGTTAAAGCTAAATCTTTTTTCACAGAATTTACAT
TTGTATGGTTTTTCACCAGTGTGACTCAACAAATGTCTTTTTAGGTAAACCATGGCCGAA
AATTGCTTTTCACACATGTCACAGCGATGTGATTTTACGTCTGTGTGAGTCCGGGCGTGA
CATTTCAACTCTTGCGATGTCCGATATTGCTTTTCACAAACATCGCACCGATGAGGTTTT
TCTTCAGAATGAATCAACATGTGTGTCTTTGCATTCCCGAGATGAACGAATCGTTTTTCA
CAGAAATCGCATTTAAACTGTTTATCACCATTGTGACTAGCAGTATGCAGTTTCAGCGTA
CGAAGGGTTACAAAACCTTTTTCACAGATTTTACAACGGTGGATTTTCTTGCTGCTGTCG
TGCATTCTTGAATCATGCATCTGTAAGTATTTTGATGTTTTAAACCTTCTGCCACATGTT
TTGCACTGAAAAGGCAATTCTTTTTTGCTTTTGTCCATTGT
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[7-59] 9.37E-9 - T[50-105] 5.56E-16 - T[106-162] 4.61E-17 - T[162-218] 4.9E-18 - T[207-259] 2.37E-14 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[11-39] 11.843 - T[41-68] 11.157 - T[69-96] 12.861 - T[97-124] 11.136 - T[125-152] 14.17 - T[153-180] 13.173 - T[181-208] 13.796 - T[209-236] 12.03 - T[237-264] 13.318 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[11-29] 0.0045 - T[153-175] 0.0042 - T[181-203] 2.2E-4 - T[237-259] 3.0E-5 |
| SMART |
Znf_C2H2_type (IPR013087) - T[11-34] 0.1 - T[41-63] 0.051 - T[69-91] 0.029 - T[97-119] 0.53 - T[125-147] 0.042 - T[153-175] 0.072 - T[181-203] 0.0017 - T[209-231] 0.07 - T[237-259] 2.6E-4 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[13-34] . - T[43-63] . - T[71-91] . - T[99-119] . - T[127-147] . - T[155-175] . - T[183-203] . - T[211-231] . - T[239-259] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN227_HUMAN | 40.625 % | 202 | 7.46E-60 |
| ZFP62_HUMAN | 41.085 % | 205 | 1.4E-60 |
| ZN235_HUMAN | 40.154 % | 198 | 7.46E-59 |
