- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S26.g01034.02.t
Possible name(s)
DCAF13; POC1A; TBL3
Gene model
Location
S26 [19,458 / 23,900]
Amino acid sequence
Length: 450
>Phmamm.CG.MTP2014.S26.g01034.02.p
MKVKVLSRNPDDYVRETKRDIHRVFRNYDPALHPFEAPREYTRALNAVKLDRVFAKPFIA
SLDGHRDGVCCMCKSKQKLNSLFSGSCDGELRQWNLTNRHCIRAVQAHTGFVRGLSCSHD
GRVVVSVGDDKTIKYWTTDALSEDRDKPINTIVAKSLYTGVDHHWSEATFATCGQTVDIW
NDERSEPVRSYRWGTDSVNSVRFNPVEANLCISTISDRSIVLYDIRAAVPLNKVVLKMKS
NVVAWNPMEAFVFTAANEDHNLYTFDMRNLNFAMNVHTDHADAVLDVDYAPTGKEFVSGS
YDRSIRIFPSNRSRSRDVYHTKRMQRVFCVKWSSDNRYLLSGSDETNVRIWKARASEKLG
TLTPREQTAARYNLKLREKFAYHPQIKRISRHRHVPKSIYNTLKEKRTMKEAQRKKTQNL
RTHSKPGAVPHVAERAKHIVSNTDANEANE
Nucleotide sequence
Length: 1,353
>Phmamm.CG.MTP2014.S26.g01034.02.t
ATGAAGGTGAAAGTTTTGTCCAGAAACCCTGATGACTATGTACGTGAAACAAAGAGGGAC
ATTCACAGAGTTTTTAGAAATTACGATCCAGCCCTTCATCCATTTGAAGCACCAAGAGAA
TATACTCGTGCCTTGAATGCAGTCAAACTAGACAGAGTTTTTGCGAAACCATTTATTGCA
TCCTTAGATGGTCACAGAGATGGAGTATGTTGTATGTGCAAATCAAAACAAAAGCTAAAT
TCTTTATTTTCTGGATCATGTGATGGCGAGTTGAGGCAATGGAATTTAACCAATCGCCAC
TGTATCCGAGCTGTACAAGCCCACACAGGATTTGTGAGAGGTCTTAGTTGTTCACATGAT
GGCAGGGTTGTTGTGTCAGTGGGTGATGACAAAACAATTAAATATTGGACAACTGATGCT
TTAAGTGAAGATAGAGACAAACCAATCAACACTATTGTTGCAAAGTCCCTTTACACTGGT
GTTGATCACCACTGGAGTGAAGCAACATTTGCCACCTGTGGACAGACAGTGGATATATGG
AATGATGAAAGATCAGAACCTGTTCGCAGTTACAGATGGGGCACAGACTCTGTAAACAGT
GTCAGATTTAACCCTGTAGAAGCAAACCTATGCATTAGCACTATTTCTGACAGGAGTATA
GTGCTGTACGATATAAGAGCAGCTGTTCCCCTAAACAAAGTGGTATTAAAAATGAAAAGT
AATGTTGTTGCGTGGAATCCAATGGAGGCATTTGTTTTCACTGCTGCAAATGAAGACCAC
AATTTGTACACGTTTGACATGCGGAATCTTAACTTTGCAATGAATGTTCACACCGATCAT
GCTGATGCAGTGCTTGATGTAGATTATGCTCCCACTGGAAAGGAATTTGTTTCTGGGAGT
TATGACAGGTCAATCCGAATATTCCCTAGCAACAGAAGTAGAAGTCGTGATGTGTACCAC
ACAAAGAGAATGCAAAGAGTATTTTGTGTAAAGTGGTCTTCCGATAATAGATATCTTTTG
TCAGGCTCTGATGAAACCAATGTTCGAATATGGAAGGCAAGGGCTTCAGAAAAACTAGGC
ACATTAACCCCAAGAGAACAAACTGCCGCTCGTTACAACCTAAAATTGCGTGAAAAGTTT
GCATACCATCCTCAAATAAAACGAATTTCAAGACACAGACACGTTCCGAAGTCAATATAC
AACACGTTGAAGGAAAAACGTACGATGAAAGAAGCACAAAGGAAGAAGACTCAGAATCTG
CGAACACATAGCAAACCTGGCGCTGTGCCTCACGTTGCTGAACGAGCAAAGCACATTGTT
TCCAACACAGATGCTAACGAAGCAAATGAATAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[42-144] 2.0E-18 - T[145-381] 7.9E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[54-363] 2.35E-53 |
| SMART |
WD40_repeat (IPR001680) - T[55-95] 0.0012 - T[98-137] 6.4E-7 - T[184-224] 0.052 - T[270-309] 0.0051 - T[311-352] 5.8E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[60-95] 0.014 - T[100-136] 4.4E-4 - T[278-308] 0.0099 - T[323-352] 6.9E-5 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[62-104] 9.205 - T[105-136] 11.043 - T[277-308] 10.308 - T[320-361] 11.511 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[62-361] 30.426 |
| Pfam |
Sof1 (IPR007287) - T[353-439] 1.6E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DCA13_HUMAN | 64.368 % | 615 | 0 |
