- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S26.g01034.01.t
Possible name(s)
DCAF13; POC1A; TBL3
Gene model
Location
S26 [18,932 / 23,969]
Amino acid sequence
Length: 473
>Phmamm.CG.MTP2014.S26.g01034.01.p
AYFLPHCLVWLRIRYRNTSQTVNMKVKVLSRNPDDYVRETKRDIHRVFRNYDPALHPFEA
PREYTRALNAVKLDRVFAKPFIASLDGHRDGVCCMCKSKQKLNSLFSGSCDGELRQWNLT
NRHCIRAVQAHTGFVRGLSCSHDGRVVVSVGDDKTIKYWTTDALSEDRDKPINTIVAKSL
YTGVDHHWSEATFATCGQTVDIWNDERSEPVRSYRWGTDSVNSVRFNPVEANLCISTISD
RSIVLYDIRAAVPLNKVVLKMKSNVVAWNPMEAFVFTAANEDHNLYTFDMRNLNFAMNVH
TDHADAVLDVDYAPTGKEFVSGSYDRSIRIFPSNRSRSRDVYHTKRMQRVFCVKWSSDNR
YLLSGSDETNVRIWKARASEKLGTLTPREQTAARYNLKLREKFAYHPQIKRISRHRHVPK
SIYNTLKEKRTMKEAQRKKTQNLRTHSKPGAVPHVAERAKHIVSNTDANEANE
Nucleotide sequence
Length: 1,948
>Phmamm.CG.MTP2014.S26.g01034.01.t
GCGTATTTTTTGCCGCATTGTCTTGTTTGGTTAAGAATCAGGTACCGGAATACTTCACAA
ACAGTAAATATGAAGGTGAAAGTTTTGTCCAGAAACCCTGATGACTATGTACGTGAAACA
AAGAGGGACATTCACAGAGTTTTTAGAAATTACGATCCAGCCCTTCATCCATTTGAAGCA
CCAAGAGAATATACTCGTGCCTTGAATGCAGTCAAACTAGACAGAGTTTTTGCGAAACCA
TTTATTGCATCCTTAGATGGTCACAGAGATGGAGTATGTTGTATGTGCAAATCAAAACAA
AAGCTAAATTCTTTATTTTCTGGATCATGTGATGGCGAGTTGAGGCAATGGAATTTAACC
AATCGCCACTGTATCCGAGCTGTACAAGCCCACACAGGATTTGTGAGAGGTCTTAGTTGT
TCACATGATGGCAGGGTTGTTGTGTCAGTGGGTGATGACAAAACAATTAAATATTGGACA
ACTGATGCTTTAAGTGAAGATAGAGACAAACCAATCAACACTATTGTTGCAAAGTCCCTT
TACACTGGTGTTGATCACCACTGGAGTGAAGCAACATTTGCCACCTGTGGACAGACAGTG
GATATATGGAATGATGAAAGATCAGAACCTGTTCGCAGTTACAGATGGGGCACAGACTCT
GTAAACAGTGTCAGATTTAACCCTGTAGAAGCAAACCTATGCATTAGCACTATTTCTGAC
AGGAGTATAGTGCTGTACGATATAAGAGCAGCTGTTCCCCTAAACAAAGTGGTATTAAAA
ATGAAAAGTAATGTTGTTGCGTGGAATCCAATGGAGGCATTTGTTTTCACTGCTGCAAAT
GAAGACCACAATTTGTACACGTTTGACATGCGGAATCTTAACTTTGCAATGAATGTTCAC
ACCGATCATGCTGATGCAGTGCTTGATGTAGATTATGCTCCCACTGGAAAGGAATTTGTT
TCTGGGAGTTATGACAGGTCAATCCGAATATTCCCTAGCAACAGAAGTAGAAGTCGTGAT
GTGTACCACACAAAGAGAATGCAAAGAGTATTTTGTGTAAAGTGGTCTTCCGATAATAGA
TATCTTTTGTCAGGCTCTGATGAAACCAATGTTCGAATATGGAAGGCAAGGGCTTCAGAA
AAACTAGGCACATTAACCCCAAGAGAACAAACTGCCGCTCGTTACAACCTAAAATTGCGT
GAAAAGTTTGCATACCATCCTCAAATAAAACGAATTTCAAGACACAGACACGTTCCGAAG
TCAATATACAACACGTTGAAGGAAAAACGTACGATGAAAGAAGCACAAAGGAAGAAGACT
CAGAATCTGCGAACACATAGCAAACCTGGCGCTGTGCCTCACGTTGCTGAACGAGCAAAG
CACATTGTTTCCAACACAGATGCTAACGAAGCAAATGAATAAAATCTTGCACTGCGTTAC
CTTTTGTTTCCGCTGTTCGGGCAACAAGCTACACCTGGTTGGGAATTTTTTTTGATTCGG
CCACATGAGAAGCAGAAAATGGAGGGTCGGGTCAAAAGGCTTAACTTTGCGTCATATTAA
TAGCATTTATTTTCAAAAACAATCACTGAAACGCATTCTTTTAAGAGATGGCAAGAGTTT
TCGTTAAGACTATCTATGAAAACAGGGCATTTATTTACAAAACTTTTATTTGATCTTATT
TGCTTGATTTTTGCGTGCACAATCGCCTTAAGCCTCCGACGCATGTATATAAATAAAGCC
CGCGCAAAAAAAGCAATTAGTGAGCAGTGACATCAACCCGCAACTGAATGTCATAACTCA
TAACCAGCACAATTGGCGGGAAAATCACCACATTGGTAACACTGTGCTATAGTTCAACTG
TATGGCGCAATAATCTACGAACACCAGCTCTGTTTTCATCATAATGCGTATGAAATGTAA
TACATGAGTTGCCTCATCTTTTGTGCCA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[65-167] 2.1E-18 - T[168-404] 8.3E-34 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[77-386] 2.75E-53 |
| SMART |
WD40_repeat (IPR001680) - T[78-118] 0.0012 - T[121-160] 6.4E-7 - T[207-247] 0.052 - T[293-332] 0.0051 - T[334-375] 5.8E-4 |
| Pfam |
WD40_repeat (IPR001680) - T[83-118] 0.014 - T[123-159] 4.7E-4 - T[301-331] 0.011 - T[346-375] 7.3E-5 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[85-384] 30.426 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[85-127] 9.205 - T[128-159] 11.043 - T[300-331] 10.308 - T[343-384] 11.511 |
| Pfam |
Sof1 (IPR007287) - T[376-462] 1.7E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DCA13_HUMAN | 64.368 % | 615 | 0 |
