- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1642.g15320.01.t
Possible name(s)
MCCC1; PC; PCCA
Gene model
Location
S1642 [28,409 / 31,943]
Amino acid sequence
Length: 655
>Phmamm.CG.MTP2014.S1642.g15320.01.p
MGIQTVAVYSEVDKNQLHVNMADEAFHIGPASSQLSYLKMDKILQVAKASGSQAVHPGYG
FLSENTEFAELCKDEGIIFVGPPSSAIRDMGIKSTSKLIMSKANVPIIEGYHGENQSDKH
LLQEARKIGFPIMIKAVRGGGGKGMRISHTEEEFIDQLNAAKREAMASFGDEVMLIEKYV
DRPRHVEVQIFGDQHGNAVHLFERDCSVQRRHQKIIEESPAPGITQETRAQLGEAAVRAA
KAVGYVGAGTVEFVMDQNQKFYFMEMNTRLQVEHPVSEMVTNTDLVEWQLLVAQGEKIPC
TQDEIPLNGHAFEARIYAENPDNEFMPGAGPLVHLSAPAQDPTIRVETGVRQGDEVSPYY
DRMIAKLVVWGPDRERALKKLNYQLGEYAVVGPDSNISFLRRLSANQSFVSGDVHTGFIP
QHYEDLFPSQTTAVDHADACRTALAHHLLGASDMPPSRDPFVSCSAFQMNLVSESTLNLK
FDGKDVKVSVKEIERGNYTMSVDGGESHSVTGKLEANANGVNYVVGTVDGVTKRVKVVRV
NQRSGTEADCLHMFPTDGQEAVKVEILLPAYLTDADSSSGVGQPIAPLTGTIQKVLVAPG
DSVDEGQPLVVMLAMKMEHTIRAPRGGVVESVMCSDGDTVKMKALLVKLNDSEAT
Nucleotide sequence
Length: 1,968
>Phmamm.CG.MTP2014.S1642.g15320.01.t
ATGGGAATCCAGACTGTAGCTGTCTATAGTGAAGTGGATAAAAACCAGCTGCATGTAAAC
ATGGCTGATGAAGCATTCCATATTGGTCCTGCATCATCACAGTTAAGCTATCTAAAAATG
GATAAAATTCTTCAGGTTGCCAAAGCATCAGGATCTCAAGCTGTTCACCCAGGATATGGC
TTTCTGTCAGAAAACACTGAGTTTGCTGAACTCTGCAAGGATGAAGGGATAATTTTTGTG
GGACCCCCATCTTCAGCTATTCGGGACATGGGTATCAAGAGCACCTCAAAATTAATTATG
TCAAAGGCAAATGTACCTATTATAGAAGGTTACCATGGGGAGAATCAGTCAGACAAACAT
CTGTTGCAAGAAGCACGTAAAATTGGATTTCCAATTATGATCAAGGCTGTAAGAGGAGGT
GGTGGTAAAGGAATGAGGATCTCTCATACAGAGGAGGAATTCATTGATCAATTAAATGCA
GCCAAAAGAGAAGCAATGGCATCCTTTGGTGATGAAGTAATGTTGATTGAAAAGTATGTA
GATAGACCGCGCCATGTAGAAGTTCAGATATTTGGTGATCAACATGGAAATGCTGTTCAC
TTGTTTGAGAGAGACTGCAGTGTACAAAGACGGCATCAGAAAATTATTGAGGAATCCCCT
GCCCCGGGTATTACACAAGAAACTCGAGCACAACTTGGTGAAGCTGCAGTTCGTGCTGCA
AAGGCTGTTGGATATGTGGGGGCTGGAACAGTGGAGTTTGTTATGGATCAAAACCAAAAG
TTTTACTTTATGGAAATGAACACAAGATTACAGGTGGAACATCCGGTTTCTGAAATGGTA
ACAAACACAGACCTTGTTGAGTGGCAGTTATTAGTGGCACAAGGTGAAAAGATTCCATGC
ACACAGGATGAAATCCCACTTAATGGGCACGCATTCGAAGCCAGGATATACGCAGAAAAT
CCAGACAACGAATTTATGCCGGGAGCTGGACCCCTAGTTCATCTCTCAGCCCCCGCTCAG
GACCCAACAATCCGGGTCGAAACCGGGGTGCGGCAGGGCGATGAAGTTTCGCCCTACTAC
GACCGCATGATTGCGAAACTCGTAGTCTGGGGCCCTGACCGAGAACGCGCGCTTAAAAAG
TTAAACTACCAACTCGGCGAGTACGCAGTCGTTGGGCCTGATTCAAATATTTCTTTTTTG
CGTCGTTTATCCGCTAATCAGAGCTTCGTTAGTGGCGACGTTCATACAGGTTTCATTCCT
CAGCACTACGAAGACCTCTTCCCGTCGCAAACAACTGCTGTCGACCACGCTGACGCATGT
AGGACCGCTCTTGCGCACCACCTGCTGGGGGCATCGGACATGCCCCCGTCACGTGACCCG
TTTGTGTCCTGCTCGGCTTTTCAAATGAACCTGGTTAGCGAGAGTACGTTAAATTTAAAG
TTCGACGGGAAAGATGTAAAAGTAAGTGTGAAAGAAATCGAAAGAGGAAACTACACGATG
TCTGTAGACGGTGGCGAATCTCACAGCGTTACCGGTAAGTTAGAGGCCAACGCCAACGGT
GTTAACTACGTTGTCGGCACTGTGGACGGCGTCACTAAACGGGTGAAAGTCGTTCGTGTG
AATCAACGCTCTGGAACGGAAGCCGATTGTCTGCACATGTTTCCCACAGACGGCCAGGAA
GCGGTGAAAGTGGAAATTCTTCTTCCAGCATACCTCACCGACGCTGACTCAAGTTCTGGC
GTTGGCCAACCAATAGCCCCACTTACAGGTACGATCCAAAAGGTACTGGTCGCTCCCGGT
GACTCAGTAGATGAGGGGCAACCCCTGGTGGTCATGCTCGCAATGAAAATGGAACACACC
ATACGAGCGCCGCGCGGTGGCGTAGTTGAGTCGGTTATGTGCTCGGATGGTGATACTGTC
AAAATGAAGGCACTACTGGTGAAACTCAACGACAGTGAAGCGACCTAA
| SUPERFAMILY |
PreATP-grasp_dom_sf (IPR016185) - T[1-90] 2.97E-34 |
| Pfam |
BC-like_N (IPR005481) - T[1-87] 1.6E-32 |
| ProSiteProfiles |
Biotin_carboxylation_dom (IPR011764) - T[1-424] 48.564 |
| Pfam |
CbamoylP_synth_lsu-like_ATP-bd (IPR005479) - T[93-299] 3.9E-74 |
| ProSiteProfiles |
ATP-grasp (IPR011761) - T[97-294] 50.22 |
| Gene3D |
ATP_grasp_subdomain_1 (IPR013815) - T[109-179] 6.7E-27 |
| ProSitePatterns |
CbamoylP_synth_lsu-like_ATP-bd (IPR005479) - T[263-270] . |
| SUPERFAMILY |
Rudment_hybrid_motif (IPR011054) - T[308-426] 4.87E-38 |
| SMART |
Biotin_COase_C (IPR005482) - T[313-420] 2.4E-47 |
| Pfam |
Biotin_COase_C (IPR005482) - T[313-420] 1.8E-34 |
| ProSiteProfiles |
Biotin_lipoyl (IPR000089) - T[563-650] 21.725 |
| SUPERFAMILY |
Single_hybrid_motif (IPR011053) - T[574-649] 1.7E-19 |
| Pfam |
Biotin_lipoyl (IPR000089) - T[590-649] 5.7E-15 |
| ProSitePatterns |
Biotin_BS (IPR001882) - T[606-623] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PCCA_HUMAN | 40.089 % | 451 | 9.35E-150 |
| PYC_HUMAN | 42.273 % | 347 | 5.89E-106 |
| MCCA_HUMAN | 56.325 % | 752 | 0 |
