- Clone 'cicl031k08' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S155.g04337.03.t
Possible name(s)
RPS4X; RPS4Y1; RPS4Y2
Gene model
Location
S155 [9,354 / 12,378]
Amino acid sequence
Length: 238
>Phmamm.CG.MTP2014.S155.g04337.03.p
RGPKKHLKRLNAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLSIFLRNRLHYALTYTEVK
RILMQRLVKVDGKVRTDTTYPAGFMDVITIEKTGENFRLVYDVKGRFAVHRITNEEAKYK
LCKVKKIGTAQKGIPYLTTHDARTIRYPHPDIKINDSVVVDIASGKITSFVRFDSGQMCM
ITGGHNLGRVGIVQHRERHPGSFDIVHVKDSQGHLFATRLSNVFIIGQANKTMISLPR
Nucleotide sequence
Length: 718
>Phmamm.CG.MTP2014.S155.g04337.03.t
CGCGTGGACCGAAAAAGCATCTGAAGCGGCTTAATGCCCCCAAACATTGGATGCTTGATA
AACTTACTGGTGTATTCGCACCCAGACCATCCACTGGACCCCACAAACTGAGGGAATGTC
TTCCTCTTAGCATTTTCTTGAGAAATCGCCTCCACTATGCCTTGACCTACACAGAGGTGA
AGAGGATTTTAATGCAACGATTGGTGAAGGTTGATGGGAAAGTAAGGACTGACACCACTT
ATCCAGCTGGCTTTATGGATGTTATCACCATTGAAAAAACTGGTGAAAACTTCAGATTGG
TCTACGATGTAAAGGGACGTTTTGCTGTTCACAGAATTACCAATGAGGAGGCCAAGTACA
AGCTCTGTAAGGTGAAAAAGATTGGAACAGCACAGAAGGGAATTCCGTACCTGACCACTC
ATGATGCGCGAACAATCCGCTATCCTCACCCTGACATCAAGATCAACGATTCTGTGGTGG
TTGATATTGCAAGTGGCAAAATTACATCCTTTGTGCGATTTGACAGCGGTCAGATGTGCA
TGATCACTGGGGGCCATAACTTGGGTCGAGTTGGAATAGTCCAGCATCGTGAACGCCACC
CAGGTTCATTTGACATTGTTCATGTCAAGGACAGCCAAGGTCATTTGTTTGCCACCAGGT
TGTCGAATGTGTTCATCATCGGTCAGGCCAACAAGACTATGATTTCCCTTCCAAGGGG
| Pfam |
Ribosomal_S4e_N (IPR013843) - T[1-37] 6.7E-22 |
| PANTHER |
Ribosomal_S4e (IPR000876) - T[1-238] 8.2E-131 |
| PIRSF |
Ribosomal_S4e (IPR000876) - T[1-238] 4.3E-97 |
| Hamap |
Ribosomal_S4e (IPR000876) - T[5-236] 35.569 |
| ProSitePatterns |
Ribosomal_S4e_N_CS (IPR018199) - T[6-20] . |
| SMART |
S4_RNA-bd (IPR002942) - T[40-104] 3.2E-6 |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[40-103] 10.089 |
| Pfam |
S4_RNA-bd (IPR002942) - T[42-88] 6.1E-7 |
| CDD |
S4_RNA-bd (IPR002942) - T[42-110] 5.11645E-6 |
| ProDom |
Ribosomal_S4e_central_region (IPR013845) - T[85-179] 2.0E-37 |
| Pfam |
Ribosomal_S4e_central_region (IPR013845) - T[93-167] 4.5E-36 |
| Gene3D |
Ribosomal_S4e_central_sf (IPR038237) - T[120-169] 7.6E-25 |
| Gene3D |
Rib_L2_dom2 (IPR014722) - T[173-238] 4.8E-32 |
| Pfam |
KOW (IPR005824) - T[176-209] 2.9E-5 |
| Pfam |
40S_S4_C (IPR032277) - T[210-238] 5.6E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS4X_HUMAN | 75.63 % | 395 | 6.74E-141 |
| RS4Y1_HUMAN | 75.21 % | 389 | 7.67E-139 |
| RS4Y2_HUMAN | 73.109 % | 376 | 1.02E-133 |