- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1209.g14088.01.t
Possible name(s)
CACHD1; CACNA2D2; CACNA2D3
Gene model
Location
S1209 [459 / 7,968]
Amino acid sequence
Length: 800
>Phmamm.CG.MTP2014.S1209.g14088.01.p
MMGAIREMLLMVFLYLYIEKGNAVQDLEPTVLRNSIANIVNRDLRHDAMQTYYNEREYTT
SSIDGMDLLIELELALRQKFARRIDVLNGLRNIIATGTAERKECCRLTSEDIEEHPSFMQ
NVTVDKACLRVSSTAAENSSRITEAFDDRCFQNLQQDPSLKWQYFGSEGGVTTQVPGPFV
APNECGNYENRFRPWYVEASNPTPKQIVIVLDRGSSMSSQIGSTNRIEVAKQVATILIDS
LNPRDTFAVIGFSENVVRSSGCFNEELALAIPDNKRTQSDFARNIRTDGESQFELGIRAA
FSFFDSTRPANNTERVIVFVSDGTPISNCPQVIQTLQQENARLNNSVTVMTFGIGVGQNQ
RILTIMPGQRGTDECVLSPVETTPAPANAPKDGRYLQIVDTTNIRNQLTEYYEFFRVEVR
EPIWTVPYLDSWGLGVVMTAALPVFINSEFGGIVALDMTLNELLEESTFFRPSESSSAFV
VDESGLVINHPLFPYVNDLDSLIVEATAFERDPEFQSIFESLKAGETDQKSFTATRYFAD
GNDTRYGVRSVQVPSTYYWKPILGTPFRLCVVVATNEMRTTPPQLAPGPPFVYNRLDIER
PENPCAYQQQYFCTTDHSTVALSPRSFTLAEEYVLMIETPSWVQELTDYMEGRSTTPTNL
KEGVRDSVTLTMEAENLWTSTSNKNSILFRYIATQDGVFRGYPGCILPKGYDANTRPWYD
HAVANPDKFAVTPPYMDLNTRELVVTFSKVLYASSQQEDVVGVMGLDLTLSGFDEIIRTA
YPECERFDTRLRQRFPNWGP
Nucleotide sequence
Length: 2,403
>Phmamm.CG.MTP2014.S1209.g14088.01.t
ATGATGGGGGCAATTAGAGAAATGCTGTTGATGGTATTTCTTTATTTATACATTGAAAAA
GGAAACGCTGTACAGGATTTGGAGCCGACGGTTTTGCGCAACAGTATTGCGAATATTGTA
AACCGTGACTTACGCCACGATGCAATGCAGACATACTACAACGAACGCGAGTACACAACG
TCATCAATTGACGGAATGGACTTGCTTATCGAGTTGGAACTTGCACTCAGGCAAAAGTTT
GCTCGAAGAATAGATGTACTGAACGGACTACGCAATATTATTGCCACAGGCACGGCTGAA
AGGAAGGAATGCTGCAGGCTTACCAGTGAGGACATTGAAGAACATCCAAGTTTTATGCAA
AACGTGACAGTAGATAAGGCTTGTCTGCGAGTTTCATCAACTGCCGCTGAAAACTCAAGT
CGAATCACAGAGGCATTTGACGACAGATGCTTCCAGAACCTCCAGCAAGATCCGTCCCTA
AAGTGGCAATACTTTGGAAGCGAGGGAGGTGTAACTACACAGGTGCCAGGGCCATTTGTA
GCACCTAACGAATGTGGAAACTATGAAAACAGATTCAGACCTTGGTATGTGGAAGCCAGC
AATCCAACGCCAAAACAAATTGTCATTGTCCTCGACCGAGGCTCGTCAATGAGCAGTCAA
ATTGGAAGCACCAATCGAATCGAAGTAGCCAAACAAGTTGCAACGATATTAATCGACAGT
TTAAATCCAAGAGATACGTTTGCGGTCATTGGATTCAGCGAAAATGTTGTCCGAAGCAGC
GGTTGCTTCAACGAAGAATTAGCGTTGGCGATTCCTGACAATAAAAGAACGCAAAGTGAT
TTCGCCAGAAACATTCGAACAGATGGTGAATCGCAGTTCGAATTGGGCATAAGAGCTGCT
TTCTCATTCTTTGACAGCACCCGACCAGCTAACAATACAGAACGGGTTATAGTGTTTGTG
TCGGATGGAACGCCAATCAGCAACTGCCCTCAAGTTATCCAAACATTACAGCAAGAAAAT
GCGCGCTTGAATAATTCAGTTACTGTGATGACGTTCGGAATCGGTGTTGGACAAAACCAG
CGGATACTTACTATTATGCCAGGACAAAGAGGAACTGACGAATGTGTGTTGTCTCCAGTA
GAAACAACGCCAGCACCAGCAAACGCACCGAAGGACGGACGTTACCTGCAAATCGTAGAT
ACCACTAATATCAGAAATCAACTGACAGAATATTACGAATTCTTCCGTGTCGAAGTCAGA
GAACCGATTTGGACTGTCCCCTACTTGGATAGCTGGGGTTTAGGCGTGGTTATGACTGCT
GCCCTTCCCGTGTTTATCAATTCCGAATTTGGTGGAATTGTGGCGCTTGATATGACTCTG
AACGAACTACTCGAAGAATCAACCTTTTTTCGTCCGAGCGAGTCATCAAGTGCTTTTGTT
GTAGACGAGTCAGGTTTGGTTATCAACCACCCCCTGTTCCCATATGTAAACGACCTGGAT
TCTCTCATCGTCGAGGCAACAGCTTTTGAACGGGATCCTGAATTTCAGTCAATATTTGAA
AGTTTGAAAGCCGGAGAAACAGACCAAAAATCGTTTACGGCCACCCGGTATTTCGCTGAT
GGAAATGACACCCGTTATGGTGTAAGAAGCGTACAAGTACCATCGACTTATTACTGGAAA
CCGATTTTGGGAACTCCGTTTCGTTTGTGTGTTGTGGTTGCCACAAACGAAATGCGCACC
ACACCCCCTCAGCTTGCACCCGGACCTCCATTTGTTTACAACCGTTTGGACATCGAACGA
CCAGAAAACCCGTGTGCTTACCAGCAGCAATATTTCTGCACAACTGATCATTCAACCGTC
GCCTTGAGCCCACGCAGTTTTACGCTAGCCGAGGAGTACGTTCTAATGATTGAAACACCA
AGCTGGGTTCAAGAACTTACCGACTACATGGAAGGAAGGTCGACTACACCTACAAACTTG
AAAGAAGGTGTACGAGACAGTGTGACTCTAACTATGGAGGCCGAAAACTTATGGACTTCA
ACTTCAAACAAAAATTCCATTCTCTTCCGTTACATTGCGACACAAGACGGTGTGTTTAGA
GGATATCCAGGCTGCATTTTGCCGAAAGGATACGATGCCAATACAAGACCATGGTACGAT
CACGCCGTTGCCAACCCGGACAAGTTTGCTGTAACTCCACCCTACATGGATTTAAACACT
AGAGAACTTGTCGTCACATTTAGCAAAGTTCTTTATGCCTCAAGTCAGCAGGAAGATGTC
GTGGGTGTGATGGGTCTGGATTTAACCTTGTCGGGTTTTGATGAAATAATTCGTACTGCA
TATCCGGAATGCGAAAGGTTTGACACAAGGTTAAGACAGCGGTTCCCAAACTGGGGTCCG
TGA
| SMART |
VWF_A (IPR002035) - T[204-385] 1.8E-8 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[204-366] 6.36E-16 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[204-374] 8.7E-24 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[206-412] 14.039 |
| Pfam |
VWF_A (IPR002035) - T[207-323] 2.2E-12 |
| SUPERFAMILY |
Sensor-like_sf (IPR029151) - T[677-775] 4.87E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAHD1_HUMAN | 27.518 % | 291 | 5.97E-84 |
| CA2D1_HUMAN | 22.493 % | 117 | 1.05E-26 |
| CA2D2_HUMAN | 26.506 % | 129 | 1.43E-30 |
