- Transcript 'Phmamm.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S1111.g13715.02.t
Possible name(s)
GAR1
Gene model
Location
S1111 [17,995 / 18,649]
Amino acid sequence
Length: 179
>Phmamm.CG.MTP2014.S1111.g13715.02.p
MSYRGGRGNFRGRGRGRGGFGGNRYNDEPPEYVVELGKVMHPCQEDLVCHCTNEKIPYFN
APVYLENKSKIGKVDEIFGQIREFYFSVKMADNMKATSFSSDTKFFIDPAKLLPLQRFLP
APPGSVSKRGRGGPRGGRGGRGRGGFGGRGGGGFRGRGNFRGGRGGGGFRGRGRGRGGY
Nucleotide sequence
Length: 540
>Phmamm.CG.MTP2014.S1111.g13715.02.t
ATGTCTTATCGTGGGGGTAGAGGTAACTTTCGTGGAAGAGGACGTGGCCGTGGTGGTTTT
GGTGGAAACAGATATAATGATGAACCACCAGAGTATGTGGTTGAGTTAGGAAAAGTTATG
CACCCATGCCAAGAAGATCTCGTGTGTCATTGCACAAATGAAAAAATTCCATATTTTAAT
GCTCCAGTTTACCTGGAAAACAAATCGAAGATTGGAAAAGTTGATGAAATATTTGGACAA
ATTCGGGAGTTCTACTTCTCAGTAAAAATGGCAGACAATATGAAGGCTACATCATTTTCC
TCAGACACCAAGTTCTTTATTGACCCTGCTAAGTTATTACCTCTTCAACGTTTTCTGCCT
GCCCCACCTGGGTCTGTATCAAAGCGTGGTCGTGGAGGTCCTCGTGGTGGAAGAGGTGGT
CGAGGCCGTGGGGGATTTGGTGGCAGAGGTGGAGGTGGCTTTCGGGGCAGAGGAAATTTC
CGAGGTGGAAGGGGCGGAGGTGGATTTAGGGGAAGGGGCAGAGGTCGTGGGGGTTATTAG
| PANTHER |
H/ACA_rnp_Gar1 (IPR021154) - T[5-178] 4.8E-58 |
| Pfam |
H/ACA_rnp_Gar1/Naf1 (IPR007504) - T[17-119] 1.8E-37 |
| Gene3D |
Gar1/Naf1_Cbf5-bd_sf (IPR038664) - T[29-120] 2.3E-44 |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[34-108] 3.39E-18 |
| ProDom |
H/ACA_rnp_Gar1 (IPR021154) - T[36-125] 2.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GAR1_HUMAN | 69.697 % | 153 | 2.6E-47 |