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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S9229.g11365.04.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S9229.g11365

Location

S9229 [458 / 1,430]

Sequences

Amino acid sequence

Length: 324

>Haaura.CG.MTP2014.S9229.g11365.04.p
MSEGKVKTVDKGLVNPEIKIPGKTVIITGANTGIGFATAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKELDLSSFESIREFAADINDTESRLDVLINNAGVFMCPQSETK
DGFEMHFGVNHLGPFLLTNLLLDLMKRSAPSRIVTLTSRAHYKWAGGKMYWDDLNLTKAY
GGTKAYCQSKLCNILFSRELSKNLEGTGVTSNSLEPGYVRTTLQRHIGTYEHPTFMDRMM
IGFYYLSRWSWRTPEEGAQTSIYCSIAPELANVSGKYFNDCKQKEESTDAKNDDFAERLW
KISAELTGLKQKSEVKEVRQSEMG

Nucleotide sequence

Length: 972

>Haaura.CG.MTP2014.S9229.g11365.04.t
ATGTCTGAGGGTAAAGTCAAAACTGTGGATAAAGGCCTCGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTTGCAACTGCTGTG
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAAAATGTTGTTTTGAAGGAACTT
GATCTCTCGTCTTTTGAATCTATTCGTGAATTTGCAGCTGACATCAATGATACCGAATCT
CGACTGGATGTTCTTATTAATAACGCCGGGGTTTTCATGTGCCCCCAATCTGAAACCAAG
GATGGGTTCGAGATGCATTTTGGGGTCAATCATCTTGGGCCTTTTCTGTTGACGAATTTG
CTGTTGGATTTGATGAAGAGAAGTGCACCAAGCAGAATCGTGACCCTCACCTCTCGCGCT
CATTACAAATGGGCTGGTGGGAAGATGTATTGGGATGATTTGAATTTGACAAAGGCCTAT
GGTGGAACGAAAGCCTACTGCCAAAGCAAGCTGTGTAATATTCTGTTCTCCAGAGAGCTG
AGTAAAAACCTTGAAGGTACTGGTGTTACATCAAATAGTTTGGAGCCGGGCTATGTCAGG
ACAACTTTACAGAGGCATATTGGTACATATGAACATCCAACATTCATGGATCGCATGATG
ATAGGCTTCTACTACCTCTCAAGATGGTCATGGAGAACTCCGGAAGAAGGAGCGCAGACT
TCAATCTACTGTTCTATTGCTCCAGAGCTTGCCAACGTCAGCGGAAAGTATTTCAATGAC
TGTAAACAGAAAGAAGAGTCCACCGATGCGAAGAATGATGATTTTGCCGAGAGATTGTGG
AAAATCAGCGCAGAGCTAACCGGGCTGAAACAGAAAAGTGAAGTAAAAGAAGTGAGACAG
AGTGAGATGGGC

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-283] 3.97E-58
Pfam
SDR_fam (IPR002347) - T[23-170] 2.4E-27
PRINTS
SDR_fam (IPR002347) - T[24-41] 4.4E-17 - T[100-111] 4.4E-17 - T[145-161] 4.4E-17 - T[186-205] 4.4E-17 - T[207-224] 4.4E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 47.195 % 267 2.65E-88
RDH13_HUMAN 51.961 % 280 2.47E-93
RDH12_HUMAN 48.829 % 267 2.11E-88