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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S9229.g11365.01.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S9229.g11365

Location

S9229 [458 / 1,400]

Sequences

Amino acid sequence

Length: 314

>Haaura.CG.MTP2014.S9229.g11365.01.p
MSEGKVKTVDKGLVNPEIKIPGKTVIITGANTGIGFATAVDLAKREARVIIACRNMEKGE
EAKKKIVEESKSENVVLKELDLSSFESIREFAADINDTESRLDVLINNAGVFMCPQSETK
DGFEMHFGVNHLGPFLLTNLLLDLMKRSAPSRIVTLTSRAHYKWAGGKMYWDDLNLTKAY
GGTKAYCQSKLCNILFSRELSKNLEGTGVTSNSLEPGYVRTTLQRHIGTYEHPTFMDRMM
IGFYYLSRWSWRTPEEGAQTSIYCSIAPELANVSGKYFNDCKQKEESTDAKNDDFAERLW
KISAELTGLKQKSE

Nucleotide sequence

Length: 942

>Haaura.CG.MTP2014.S9229.g11365.01.t
ATGTCTGAGGGTAAAGTCAAAACTGTGGATAAAGGCCTCGTGAATCCAGAGATCAAAATT
CCTGGCAAAACAGTGATCATAACAGGAGCTAACACTGGAATTGGTTTTGCAACTGCTGTG
GATTTGGCCAAGAGAGAAGCGAGAGTTATTATCGCTTGCAGGAATATGGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAAAATGTTGTTTTGAAGGAACTT
GATCTCTCGTCTTTTGAATCTATTCGTGAATTTGCAGCTGACATCAATGATACCGAATCT
CGACTGGATGTTCTTATTAATAACGCCGGGGTTTTCATGTGCCCCCAATCTGAAACCAAG
GATGGGTTCGAGATGCATTTTGGGGTCAATCATCTTGGGCCTTTTCTGTTGACGAATTTG
CTGTTGGATTTGATGAAGAGAAGTGCACCAAGCAGAATCGTGACCCTCACCTCTCGCGCT
CATTACAAATGGGCTGGTGGGAAGATGTATTGGGATGATTTGAATTTGACAAAGGCCTAT
GGTGGAACGAAAGCCTACTGCCAAAGCAAGCTGTGTAATATTCTGTTCTCCAGAGAGCTG
AGTAAAAACCTTGAAGGTACTGGTGTTACATCAAATAGTTTGGAGCCGGGCTATGTCAGG
ACAACTTTACAGAGGCATATTGGTACATATGAACATCCAACATTCATGGATCGCATGATG
ATAGGCTTCTACTACCTCTCAAGATGGTCATGGAGAACTCCGGAAGAAGGAGCGCAGACT
TCAATCTACTGTTCTATTGCTCCAGAGCTTGCCAACGTCAGCGGAAAGTATTTCAATGAC
TGTAAACAGAAAGAAGAGTCCACCGATGCGAAGAATGATGATTTTGCCGAGAGATTGTGG
AAAATCAGCGCAGAGCTAACCGGGCTGAAACAGAAAAGTGAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-283] 3.44E-58
Pfam
SDR_fam (IPR002347) - T[23-170] 2.3E-27
PRINTS
SDR_fam (IPR002347) - T[24-41] 3.9E-17 - T[100-111] 3.9E-17 - T[145-161] 3.9E-17 - T[186-205] 3.9E-17 - T[207-224] 3.9E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 47.195 % 267 1.68E-88
RDH13_HUMAN 51.961 % 280 2.33E-93
RDH12_HUMAN 48.829 % 267 1.8E-88