- Clone 'ma121m03' >
- Clone 'cien201511' >
- Transcript 'Haaura.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S843.g06859.01.t
Possible name(s)
SGSM1; SGSM2; TBC1D15
Gene model
Location
S843 [4,692 / 19,708]
Amino acid sequence
Length: 1,109
>Haaura.CG.MTP2014.S843.g06859.01.p
VALVKSCFKLFSAAEFHESLLRTVKRQVKAIMEEAVTKKFVHEESEHVLRLSATIQTCLL
DRLKKRTAGFLRSNKIANLFNKVKKSIPEVQQLITKIEETEASYESQLADIEKGINGTKS
QCMFVRQLKHVWVRLALTEKVLAKMVQHLVDNSSKYYEKNAIMADRVCGQLISSLLVGPC
ALEYTKMKTSDHYWSDPPADELLQRHKLHSRTQSPGSPGRRPALHAAAKYGAFDSGDKYP
ANANNIDSSFRDYVESLHQNSKSTLLYGKNNVVVQPREEINPIPGYLSLHQIADLLHVKW
TPNQLMHSGESNTKDINCNRQGSTEQQSPDIDGTRSHQIPNGISYLHAGRKFYKNKNENN
KARSPVSYWEYAMSVNVCDIVYLHCHQRSDSGGTLVLVGQDGVQRPPICFPPGGHLLAFL
TCLETGLLPHGHLDPPLWAQHGKGKVFPRLRNRSSRSSSSSGSQSEAGEEVTDFVFRVTT
GTSISTYLPSHIDLNPIQDNFNAYATNSSLYLSHGSDYSIKSNSRSSLKVLCDTMRRQII
SRAFYGWLAHCRHLSTVRTHLSALVIPDQCPIPSEPVAPIDEAMWNEFIKSGRIEDKTEL
MRHVYFGGVQHSSRKTVWPFLLNHYPLESSPEERVRIDREIEMEFKTVMSDWMAVEKIVK
QKEKEIQAAHLAKLSCDSVTSSVSSFDGQPQFPPAVLRKQSTVNDVFASTESDCSFVLPI
DEEVDVDNEIQDNGGVHGKEERIDRNRKENRSLTKKALNTARRHSDHTPYSSISTEPSLL
DRRSSNVTNPPGESFDDLKLDNILETDDNCSIGEENGTDQNYIKEEKVHPRRLQKQTVID
IEGNMDKVKDAVITNGDLHDNNNRTEVDDSSAESQKSGATSYSPELLDSFGLNLHRIEKD
VHRCDRNHSYFAEPKNLNKLRNVMCSYVWNHLEVGYMQGMCDLAAPLLIIMDDESRVYSC
FTQLMKRMINNFPNGGAMDSHFANMRSLIQILDSELFERTVHQNGDYTHFYFCYRWFLLD
FKRELSYEEDVFAVWERIWAARHVSSEHFVLFFALALLHTYRDIILNNDMVFTDIIKFFN
EMAERHDAKKILKLAQDFVFEVQSLISK*
Nucleotide sequence
Length: 3,327
>Haaura.CG.MTP2014.S843.g06859.01.t
GTCGCACTTGTGAAATCATGTTTCAAACTTTTTTCAGCGGCTGAATTCCATGAATCCCTG
CTCAGAACAGTCAAACGTCAAGTGAAGGCTATCATGGAAGAAGCAGTGACAAAAAAATTT
GTACATGAAGAAAGTGAACATGTACTTCGACTCAGTGCAACGATTCAGACATGTCTGCTC
GACCGATTGAAAAAGAGGACTGCCGGCTTCTTACGGAGTAACAAGATCGCGAATTTGTTC
AATAAGGTTAAGAAATCAATTCCAGAAGTCCAGCAATTAATCACGAAAATTGAAGAAACT
GAAGCTTCCTACGAGAGCCAACTGGCAGACATCGAAAAAGGAATAAACGGTACAAAATCC
CAGTGTATGTTCGTACGACAATTAAAACATGTGTGGGTTCGTCTGGCCCTCACAGAAAAA
GTCCTTGCAAAAATGGTTCAACACTTGGTTGACAATAGCAGTAAATATTATGAGAAGAAT
GCTATCATGGCCGACCGTGTATGTGGACAGTTAATTTCTTCATTGCTCGTTGGCCCTTGT
GCTCTCGAGTACACGAAAATGAAAACCTCAGATCACTATTGGTCAGACCCGCCTGCTGAC
GAACTTCTCCAAAGACACAAGTTACACAGCAGAACCCAATCTCCAGGATCCCCCGGTCGT
CGACCAGCTCTTCATGCTGCAGCTAAATACGGAGCGTTTGATTCTGGCGATAAATATCCT
GCGAACGCAAACAACATTGATTCATCTTTCCGCGATTATGTGGAATCGCTTCACCAGAAC
TCAAAATCTACTTTACTTTACGGCAAAAATAATGTGGTTGTCCAGCCGAGAGAGGAGATC
AACCCAATACCAGGCTATTTATCTCTTCATCAAATTGCCGATTTGTTACATGTAAAATGG
ACGCCCAATCAACTGATGCACAGTGGTGAAAGTAACACGAAAGACATCAACTGCAATCGA
CAAGGCAGCACTGAGCAGCAAAGTCCTGACATTGATGGTACAAGATCACATCAAATACCG
AACGGAATCTCCTACTTGCATGCGGGTAGAAAATTTTATAAAAACAAGAATGAAAACAAC
AAAGCAAGAAGTCCGGTGTCCTATTGGGAATATGCCATGAGTGTCAATGTCTGCGACATT
GTGTACCTTCATTGTCATCAGAGAAGTGACAGTGGAGGAACGCTTGTACTGGTCGGACAA
GATGGAGTTCAACGTCCACCAATATGTTTTCCTCCGGGCGGACACCTTCTTGCATTTCTG
ACTTGTCTCGAGACTGGACTTCTGCCTCATGGTCATCTTGATCCTCCTCTTTGGGCTCAG
CATGGGAAAGGTAAAGTTTTTCCAAGATTAAGAAACCGCTCGTCCAGATCAAGTTCCAGT
AGCGGAAGTCAGTCAGAGGCGGGAGAAGAAGTTACAGATTTTGTATTCCGTGTTACAACT
GGGACTTCCATCTCCACCTATCTCCCATCCCACATCGACTTAAATCCTATTCAAGATAAT
TTTAATGCATACGCCACAAACTCCAGCCTCTACCTATCTCATGGCTCTGACTACAGCATA
AAGTCTAATTCAAGATCATCTCTAAAAGTTCTCTGCGATACAATGCGAAGACAGATCATA
TCTCGGGCATTCTACGGCTGGCTTGCTCACTGCCGCCATCTCTCAACGGTACGGACACAT
CTGTCAGCTCTAGTAATTCCGGACCAGTGTCCCATTCCTTCAGAGCCAGTCGCACCTATT
GATGAAGCCATGTGGAATGAATTTATCAAAAGTGGCAGGATAGAAGATAAGACAGAGCTC
ATGCGTCATGTGTACTTTGGAGGCGTCCAGCATTCTTCAAGAAAAACTGTGTGGCCATTT
TTACTTAATCACTATCCGCTTGAGAGTTCCCCCGAAGAGAGAGTTCGTATCGATAGAGAA
ATTGAAATGGAATTCAAAACTGTAATGTCCGACTGGATGGCTGTTGAAAAAATTGTCAAA
CAGAAAGAGAAAGAGATACAAGCAGCTCATCTGGCAAAACTATCCTGTGACAGTGTAACA
AGCTCTGTATCCAGTTTTGATGGACAACCACAGTTCCCACCTGCTGTACTCAGAAAACAA
TCCACTGTCAATGATGTCTTTGCCTCCACAGAGTCAGACTGTTCTTTTGTGCTTCCTATA
GATGAGGAAGTGGATGTAGATAATGAAATTCAAGATAATGGGGGTGTTCATGGGAAGGAA
GAAAGAATTGATAGAAATAGAAAAGAAAACAGATCACTCACAAAGAAAGCATTGAACACG
GCAAGAAGGCACAGCGATCACACTCCATATTCATCAATAAGTACTGAACCTTCACTTCTG
GATAGAAGATCTTCAAATGTTACAAATCCCCCTGGAGAAAGTTTTGATGATCTGAAACTA
GACAACATCCTCGAAACCGATGACAACTGCTCTATAGGTGAAGAAAACGGCACAGATCAA
AACTATATCAAAGAAGAAAAGGTCCACCCGAGACGTTTACAAAAACAAACTGTGATTGAT
ATCGAAGGAAATATGGATAAAGTAAAAGATGCCGTCATCACCAATGGAGATCTCCATGAC
AATAACAATCGAACGGAAGTTGATGATTCTTCTGCTGAATCTCAGAAATCTGGTGCTACT
TCGTACTCCCCTGAGCTCCTTGATAGCTTTGGACTCAACCTGCATAGAATTGAAAAAGAC
GTTCATAGATGCGATAGAAACCACAGCTACTTTGCTGAACCTAAAAATCTGAATAAACTT
CGCAACGTCATGTGCAGTTATGTGTGGAACCATTTGGAAGTTGGCTACATGCAGGGCATG
TGTGACCTAGCAGCACCATTGCTTATCATCATGGACGATGAGAGTCGTGTCTATAGTTGC
TTTACTCAGTTGATGAAGCGAATGATCAATAACTTTCCTAACGGCGGAGCTATGGACTCG
CACTTTGCTAACATGCGTTCATTAATCCAAATTCTCGATTCAGAACTCTTTGAACGAACT
GTTCATCAGAATGGTGACTACACTCACTTTTATTTCTGCTATCGATGGTTTTTGCTCGAT
TTTAAGCGAGAATTATCCTATGAGGAAGATGTTTTTGCTGTCTGGGAGAGGATCTGGGCA
GCTCGTCATGTATCCTCCGAACATTTTGTTCTTTTCTTTGCTCTTGCCCTTTTACACACA
TATCGTGATATCATACTTAACAATGACATGGTATTCACTGATATCATCAAGTTTTTCAAT
GAAATGGCAGAACGTCACGACGCCAAAAAGATTCTAAAACTTGCCCAGGACTTTGTTTTC
GAGGTACAAAGTTTGATTTCAAAATGA
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[14-200] 1.16E-24 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[42-192] 18.449 |
| Pfam |
Run_dom (IPR004012) - T[51-189] 1.5E-25 |
| SMART |
Run_dom (IPR004012) - T[129-189] 1.9E-13 |
| CDD |
SGSM1/2 (IPR037745) - T[263-480] 7.08406E-75 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[584-647] 6.54E-41 - T[880-996] 6.54E-41 - T[976-1097] 1.15E-20 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[605-1069] 1.0E-30 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[608-1042] 27.337 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[865-1065] 2.8E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM1_HUMAN | 43.842 % | 931 | 0 |
| SGSM2_HUMAN | 43.568 % | 551 | 3.0E-179 |
| TBC15_HUMAN | 32.512 % | 120 | 8.6E-28 |