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  1. Transcript 'Haaura.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S765.g06564.02.t

Possible name(s)

CLIP1; CLIP2

Location

S765 [2,233 / 29,102]

Sequences

Amino acid sequence

Length: 1,603

>Haaura.CG.MTP2014.S765.g06564.02.p
KSEVSSSYGRKTMSSGTSALQEALKEKQQHVESLMAERDIERSDMMQAIQEAAELNKAME
ETKIQFQQKMAEKESELDALKGLVEHADVDKVALRQEVDEQKAVIGDLLFRLEEEKINKD
DLQSEITGIQKNIREMEVSLNIEQNRSQVLQRDLENSRILIKQLCTKHISEIAPVDFPVR
AVHIEALGVDDKSEVESLRQERDRGLEMVEELSARLAEADLLQQEAVASDVVDALEDRIS
ELLQQIEKMKMQSEENAKISEKNLLELQEITNEKFKSNSDGMNTKIQELTDQNSNTKLLL
VTAIAEAEEKQMTLEDFQKQIEQLLSSKSALEEENRNIIQLSGDSSSQLNALMENLHKKE
RVIEQLQSEIRISATSCKEEEVKKKSCETELTTLKASQKISDQQLEDFRNKLTATQSIVD
ELHTKLKESVTAHEELLLTLTNVNTGKLIVESQLEELGKKYTEIEETLHTAQGERNSFEE
KLKTATTECSDLIGRCESIQLQCTSFGMEKQQLSETCQNQLIQINELSESQEKDKKSYEE
AKTALTQLCEQTEVEKVKLLQQLEEFKETSERQVVQLAESTKHMDNLLQEKTAVEEEKDA
IKNSLEKAEETVKAFEENLVSCKKEKDDLEKEFNDSRNTFQEQRSHLEHSVTSLKENEIV
LEEKYGKLEHENKDLLYLKESLKDDLIKANKLVESTGVTLLEAEEKYNTLNGEYTGVQKQ
LEDSSLQYQKEVDRSKELHFVVRNLETENSSLQQKLDLMSEEQGGIKQESFQLLDKIQDL
EVSKARLETDACKNIDEMTKLQKEIEALNGEKLSVENLISDVKAELQLSNENLKTTSQML
EQQNEEKGKLLLQLEESEAIIQTKNKELDESLSRTSTFELEISNLKSNLQISSSSDEEQQ
SKISSFVEEVSILQQDKIRLQSENAELEKMKQEYSHKITSLNNENGDIRKQLLVSNEEFE
KSTESIQKGEENIQEMRNEINELTKNFKQEEETLNTANNLIENLREKNQDIITNLASAKE
SEAYVRDELARKCDECEGISMELQNLRQTSEVHMEKHHILEKELNEAKEEYTRDKSNLKQ
EYDAAKQRSEELKEILEEKEKKINDSLSDISKFQLEISDLESKIQVSTCSNTEQQQKIVS
LVEEVRTLQEEKNRLQQQNIELEEVKQEYSDKIALLNDEKSDFQKQVLESNAEFKNNTES
IRLKAEENNHRMLLEKEELQKSIQHEKDIGEQRKKTVANIEEKNQELLSNLGIAKESESN
IRIELTKKCDEYEIMSREMQTLKENIEFHKKKNSTLQQKLDSLLQEQNQFNLERDCAKLR
LSELEEMLAEKGKAENEHRSKILVLEVDFANSKEDYCKLEEEHKLVTEAHKKLKSQQQKM
EKRQAVLKSEFSKERDSLQQTIDITTALIEKKQEETEQYMQEIVILKKENASILTLQESL
ETLEKERKMLQRELDSMKSSPIAGSSSTEDSGVGTDDELRGQVEFLNSVIVDQQKKISDL
SEKISELEAMLLNGEDVDECEIDTEFYESEQHRSHAAPRLFCDICDIFDAHDTEDCPTQS
MVDDVTSLPQTVHNAAQGEQRSYCDYCEIFGHWTEECTQEEEE

Nucleotide sequence

Length: 4,809

>Haaura.CG.MTP2014.S765.g06564.02.t
AAATCTGAAGTATCGTCAAGTTATGGAAGGAAAACCATGTCATCTGGAACATCTGCATTA
CAAGAGGCTCTTAAGGAAAAGCAACAACATGTAGAATCTCTGATGGCAGAAAGGGACATC
GAAAGATCCGACATGATGCAAGCAATCCAAGAAGCTGCTGAATTAAATAAAGCTATGGAG
GAAACCAAGATTCAATTTCAGCAGAAAATGGCAGAGAAAGAATCAGAGTTGGATGCACTC
AAAGGGTTGGTCGAACATGCTGATGTGGATAAAGTAGCATTGCGGCAAGAGGTTGATGAA
CAAAAAGCTGTTATTGGGGACCTACTATTCCGATTAGAGGAAGAGAAAATTAATAAGGAT
GATCTCCAGTCTGAGATAACTGGAATCCAGAAAAACATTAGGGAGATGGAAGTCAGCCTC
AATATCGAGCAAAATCGCTCACAAGTGCTGCAGAGAGATTTGGAGAATTCAAGAATATTA
ATAAAACAATTGTGTACAAAGCACATCAGCGAAATAGCCCCAGTAGATTTTCCGGTACGT
GCTGTGCACATAGAGGCTCTAGGAGTTGATGACAAGTCAGAAGTGGAAAGTTTGAGACAA
GAGAGAGATAGGGGCTTGGAAATGGTAGAAGAACTTTCAGCAAGACTTGCAGAAGCTGAT
CTGTTGCAACAAGAGGCTGTGGCATCAGATGTCGTCGATGCCTTGGAAGATCGCATATCT
GAGCTGCTTCAGCAAATTGAAAAAATGAAAATGCAGTCGGAAGAAAATGCAAAGATTAGC
GAAAAAAATCTTCTTGAACTTCAGGAAATAACAAACGAGAAATTTAAATCTAATTCAGAT
GGAATGAACACTAAAATCCAGGAATTGACTGATCAGAACAGTAATACCAAACTCTTATTA
GTCACCGCCATTGCCGAAGCAGAAGAGAAGCAAATGACATTAGAAGATTTTCAAAAACAG
ATTGAACAATTGTTGTCAAGTAAATCTGCACTGGAAGAAGAAAATAGAAATATTATCCAG
TTGAGTGGTGACAGTTCTTCTCAACTGAATGCTCTAATGGAAAATCTTCACAAAAAAGAA
AGGGTGATTGAACAATTGCAAAGCGAAATTAGAATTTCTGCGACATCTTGCAAAGAAGAA
GAGGTTAAAAAGAAATCATGTGAAACAGAATTAACAACACTGAAGGCATCACAGAAAATA
TCCGATCAGCAGTTAGAAGATTTCCGAAATAAATTAACAGCTACTCAATCTATAGTGGAT
GAATTGCATACTAAATTGAAAGAGAGTGTAACCGCTCATGAAGAGTTACTTTTGACATTA
ACAAATGTGAATACTGGAAAGCTTATAGTGGAGTCACAACTGGAAGAGCTGGGAAAAAAA
TACACTGAAATTGAGGAAACTCTGCATACAGCTCAAGGGGAAAGGAATTCATTTGAAGAA
AAATTAAAAACGGCTACAACAGAATGTTCTGACTTAATTGGACGGTGTGAATCAATTCAA
CTCCAATGCACTTCTTTTGGAATGGAAAAGCAACAGCTTTCAGAAACTTGCCAGAATCAG
CTAATACAGATCAATGAATTGTCTGAGTCCCAGGAAAAAGATAAAAAATCGTACGAGGAA
GCAAAGACGGCACTGACTCAGCTGTGTGAGCAAACAGAAGTTGAAAAAGTAAAACTGCTT
CAGCAGTTGGAGGAATTTAAAGAAACAAGTGAAAGACAAGTAGTCCAACTCGCTGAAAGT
ACAAAGCATATGGACAATCTTTTACAAGAAAAAACTGCTGTTGAAGAGGAAAAAGATGCT
ATAAAGAATTCCTTGGAGAAGGCCGAAGAGACTGTTAAAGCTTTTGAAGAAAATCTTGTT
TCTTGTAAAAAAGAAAAAGATGATTTGGAAAAGGAATTCAATGACAGCAGAAACACTTTT
CAAGAACAAAGGTCCCACTTGGAACATAGTGTGACATCTTTGAAAGAAAACGAAATTGTG
CTTGAAGAGAAATATGGAAAACTTGAACATGAAAATAAGGATCTTTTATATCTTAAGGAA
TCATTGAAGGATGACCTCATAAAAGCCAACAAACTTGTTGAAAGTACCGGTGTGACATTG
CTTGAAGCAGAGGAAAAGTACAATACACTGAATGGAGAATATACTGGAGTTCAAAAGCAA
TTAGAAGATTCTTCATTGCAATATCAAAAGGAAGTGGACAGAAGCAAGGAGTTACATTTT
GTTGTTAGAAATTTGGAAACAGAAAACTCCTCATTACAGCAAAAATTAGATTTAATGTCT
GAAGAGCAAGGGGGTATCAAGCAGGAATCTTTTCAACTCCTTGATAAGATCCAAGACTTG
GAAGTTTCGAAAGCCCGGCTGGAAACAGATGCTTGTAAGAATATAGATGAGATGACCAAG
CTGCAGAAAGAGATAGAAGCACTGAATGGAGAAAAACTATCAGTGGAGAATCTGATATCT
GATGTGAAAGCAGAATTGCAACTCAGCAATGAAAACCTGAAAACAACGTCTCAGATGTTG
GAACAGCAAAACGAAGAGAAAGGAAAGTTACTATTACAACTGGAAGAATCTGAAGCAATA
ATCCAGACTAAAAATAAGGAACTAGATGAAAGTCTTTCTCGTACTTCAACTTTTGAGTTG
GAGATTTCAAATTTGAAATCAAATCTTCAAATATCCTCATCATCCGATGAGGAACAGCAG
AGCAAAATTTCCTCTTTCGTAGAAGAGGTTAGCATTCTACAACAAGACAAAATACGGTTG
CAATCGGAAAATGCTGAGCTTGAGAAAATGAAACAAGAATATTCACATAAAATTACATCG
CTGAATAATGAGAACGGCGATATCCGTAAACAACTTTTAGTATCAAATGAGGAGTTTGAG
AAATCAACTGAATCAATACAGAAAGGAGAGGAAAATATTCAAGAAATGCGGAATGAAATC
AATGAATTAACGAAGAACTTCAAACAAGAAGAGGAAACTCTAAATACAGCAAACAATTTG
ATTGAAAACCTAAGAGAAAAGAATCAGGATATCATAACTAATCTTGCAAGTGCCAAAGAA
TCTGAGGCATATGTCAGAGATGAACTGGCAAGAAAATGTGATGAATGTGAAGGAATATCA
ATGGAATTACAAAATTTAAGACAGACCAGTGAGGTACATATGGAAAAACACCACATCTTG
GAAAAAGAGCTGAATGAAGCTAAAGAGGAATATACGAGGGATAAATCTAATCTTAAGCAG
GAGTATGATGCTGCAAAGCAGAGGTCAGAAGAGCTAAAGGAAATTTTGGAAGAGAAAGAA
AAGAAAATCAATGACAGTCTGTCAGACATTTCAAAATTCCAGTTAGAGATTTCGGATCTC
GAGTCCAAGATTCAAGTTTCCACATGTTCCAATACAGAGCAGCAGCAGAAGATAGTTTCA
CTTGTAGAAGAGGTTAGGACCTTACAGGAAGAAAAGAATAGGTTGCAACAGCAAAATATC
GAACTTGAGGAAGTGAAGCAAGAGTATTCTGATAAAATTGCATTGTTGAATGATGAAAAA
AGTGACTTTCAAAAACAGGTTCTGGAATCCAATGCAGAATTCAAGAATAATACTGAATCA
ATTCGGCTAAAGGCGGAAGAGAATAATCATAGAATGCTTCTTGAGAAGGAAGAATTACAA
AAAAGCATCCAGCATGAAAAAGATATCGGAGAACAAAGAAAGAAAACGGTGGCGAACATA
GAAGAGAAGAATCAAGAATTACTTTCAAATCTTGGCATTGCAAAGGAATCTGAGTCAAAC
ATTAGAATTGAGCTGACAAAAAAATGTGATGAATACGAAATTATGTCGAGGGAAATGCAG
ACTTTGAAAGAAAATATTGAATTCCATAAGAAAAAAAATTCAACTTTGCAGCAAAAATTG
GATTCTTTGCTTCAGGAACAAAACCAATTCAATTTGGAGAGAGACTGTGCAAAGCTAAGA
TTAAGTGAACTAGAAGAAATGTTAGCAGAAAAAGGAAAGGCAGAGAACGAGCATAGAAGT
AAGATACTTGTCCTCGAAGTAGATTTTGCAAACTCAAAAGAGGACTATTGCAAATTGGAA
GAAGAGCATAAGCTGGTCACTGAAGCACATAAAAAGTTGAAATCACAGCAACAAAAGATG
GAAAAAAGGCAAGCCGTACTGAAGTCTGAATTCTCTAAAGAGAGAGACTCGTTGCAACAG
ACTATTGATATTACAACAGCACTTATAGAAAAGAAACAAGAAGAGACTGAGCAATATATG
CAAGAAATTGTTATTCTGAAGAAAGAAAACGCTTCAATCTTGACTTTGCAAGAATCTTTG
GAAACACTTGAGAAAGAGAGGAAAATGTTACAAAGAGAATTAGATTCTATGAAATCCTCA
CCCATCGCTGGCTCTTCTTCAACAGAGGACAGTGGAGTGGGAACTGATGATGAACTAAGG
GGACAAGTTGAATTTTTGAATTCTGTAATTGTGGATCAGCAGAAAAAAATCAGCGATTTA
TCCGAAAAGATTTCCGAATTAGAAGCGATGCTACTTAATGGAGAAGATGTGGACGAGTGT
GAAATCGACACTGAATTCTATGAATCCGAGCAGCATAGAAGTCACGCGGCTCCACGACTA
TTCTGTGATATTTGTGATATTTTTGATGCTCATGACACTGAAGATTGTCCAACTCAGTCC
ATGGTTGATGATGTAACATCTTTACCTCAAACAGTGCACAATGCCGCTCAAGGGGAGCAG
AGATCATATTGTGACTATTGTGAAATATTCGGTCACTGGACAGAAGAATGTACACAAGAA
GAAGAAGAA

InterProScan

Pfam
CLIP1_ZNF (IPR032108) - T[1539-1556] 1.4E-6 - T[1581-1597] 1.4E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLIP1_HUMAN 34.463 % 169 4.63E-42
CLIP2_HUMAN 32.459 % 105 1.45E-22