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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6489.g11102.03.t

Possible name(s)

RDH12; RDH13

Gene model

Haaura.CG.MTP2014.S6489.g11102

Location

S6489 [1,160 / 1,787]

Sequences

Amino acid sequence

Length: 209

>Haaura.CG.MTP2014.S6489.g11102.03.p
MCPQSETKDGFETQFGTNHLGHFLLTNLLLDSLKKSAPSRIVTVSSLVHYRWALTSMQWD
DLNLRKNYDSILAYGQSKLCNVLFSRELSKKLQGTGVTSNSLEPGVVETDLRRHVGTHEK
PSFKDRLMSLYTYFTGWALSTQEKGAQTSIYLAVAPELADVSGKYYSNCKQRGESYDAMN
DEFAERLWKISEEFTGLNPKSEGEDVKQT

Nucleotide sequence

Length: 627

>Haaura.CG.MTP2014.S6489.g11102.03.t
ATGTGCCCCCAATCCGAGACCAAAGATGGGTTCGAGACGCAGTTCGGTACGAATCATCTG
GGGCATTTTCTCTTAACGAATTTGTTGTTGGATTCATTGAAGAAAAGTGCACCAAGCAGG
ATTGTGACTGTGTCTTCTCTTGTTCACTATAGATGGGCCTTAACATCAATGCAATGGGAC
GATTTGAATTTGAGAAAGAACTATGATTCAATCCTAGCTTATGGCCAAAGCAAGCTATGC
AATGTGCTTTTCTCTAGAGAGCTAAGCAAGAAACTGCAAGGCACTGGTGTTACATCAAAT
AGTTTGGAACCTGGCGTGGTTGAGACAGATTTACGGAGACACGTTGGAACACATGAGAAG
CCTTCGTTCAAGGACCGGTTGATGTCGTTATACACTTATTTTACAGGATGGGCGCTTAGC
ACCCAAGAAAAGGGGGCTCAAACCTCTATTTACTTGGCAGTTGCCCCAGAGCTTGCAGAT
GTCAGCGGAAAGTATTACTCCAACTGCAAACAGAGGGGAGAGTCGTACGATGCGATGAAT
GATGAGTTTGCAGAGAGATTGTGGAAAATCAGTGAAGAATTTACTGGTCTTAACCCGAAA
AGTGAGGGAGAAGATGTGAAGCAAACT

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[5-171] 1.41E-24
PRINTS
SDR_fam (IPR002347) - T[33-49] 6.7E-5 - T[74-93] 6.7E-5 - T[95-112] 6.7E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 50.99 % 168 2.04E-51
RDH14_HUMAN 49.746 % 167 6.64E-51
RDH12_HUMAN 48.731 % 162 2.19E-49