Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S6035.g11024.01.t

Possible name(s)

RDH11; RDH13

Gene model

Haaura.CG.MTP2014.S6035.g11024

Location

S6035 [908 / 1,748]

Sequences

Amino acid sequence

Length: 270

>Haaura.CG.MTP2014.S6035.g11024.01.p
DLAKREARVIIACRNIEKGEEAKKKIVEESKSENVVLKKLDLSSFESVREFAADINATES
RLDVLINNAGVMMCPQSETKDGFELQFGTNHLGHFLLTNLLLDLMKRSAPSRIMTVSSMT
HHRWFGTSMQWDDLNLRNNYDSTRAYGQSKLCNVLFSRELSKKLQGTGVTSNSLEPGAVK
TDLQRHVGTHSWPTFRDYLANIGNFLTRWFYGTPEKGAQTLIYLAVAQELVEASGNFYSN
CTQTEESYDAKNDDFAKRLWKMSEEFVGM*

Nucleotide sequence

Length: 840

>Haaura.CG.MTP2014.S6035.g11024.01.t
GATTTGGCCAAGAGAGAAGCAAGAGTTATTATCGCTTGCAGGAATATAGAAAAGGGAGAA
GAAGCAAAAAAGAAGATTGTTGAAGAATCAAAATCAGAGAATGTTGTTTTGAAGAAACTT
GATCTCTCGTCGTTTGAATCTGTTCGAGAATTTGCCGCTGACATCAATGCTACTGAATCT
CGACTTGACGTTCTTATTAATAACGCCGGGGTGATGATGTGCCCGCAGTCTGAGACCAAG
GATGGGTTCGAGCTGCAGTTTGGGACGAATCATCTGGGGCATTTCCTTTTAACGAATCTG
TTGTTGGATCTGATGAAGAGAAGTGCTCCAAGCAGGATCATGACCGTATCATCTATGACT
CATCACAGATGGTTCGGAACATCAATGCAATGGGACGATTTGAATTTAAGGAACAATTAT
GATTCAACTCGAGCTTATGGCCAAAGCAAGCTATGTAATGTGCTTTTCTCTAGAGAGCTA
AGCAAGAAATTGCAAGGCACTGGTGTTACATCAAATAGTTTAGAACCTGGAGCTGTTAAG
ACGGATTTACAGAGGCATGTTGGAACACACAGTTGGCCAACATTCAGGGATTATCTCGCA
AACATTGGAAATTTCTTAACAAGATGGTTTTATGGGACCCCAGAAAAGGGAGCTCAAACC
TTGATTTACTTGGCAGTTGCCCAGGAGCTTGTTGAAGCCAGTGGGAATTTCTACTCAAAC
TGCACACAGACGGAAGAGTCGTACGATGCGAAAAATGATGATTTTGCCAAGAGATTGTGG
AAAATGAGTGAAGAATTTGTCGGAATGTAGAAGAAAAGTGAGGAAGGAGGAGCAGAATGA

InterProScan

SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[2-242] 2.29E-46
PRINTS	SDR_fam (IPR002347) - T[60-71] 2.0E-5 - T[60-71] 1.6E-12 - T[105-121] 1.6E-12 - T[111-119] 2.0E-5 - T[146-165] 2.0E-5 - T[146-165] 1.6E-12 - T[167-184] 1.6E-12 - T[207-227] 1.6E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	44.61 %	219	1.77E-70
RDH13_HUMAN	47.778 %	231	7.9E-75
RDH12_HUMAN	46.125 %	218	6.89E-70