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  1. Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S539.g05626.01.t

Possible name(s)

LENG8; MCM3AP; SAC3D1

Location

S539 [11,347 / 17,737]

Sequences

Amino acid sequence

Length: 1,768

>Haaura.CG.MTP2014.S539.g05626.01.p
MSFNPPNTTASISSGVFSSTFTSQKDVFGANNSSNVFGFAPPSSSQTRSTLFGSSQAQEN
VTFNPPKSSVFMGRTATFTSADQQANTSVFGSAQQNKTAQMTSGQSSVFGQGSSSSFGGA
STESSSSIFMSDLPSVNQNPSSSFQGGSSFAKSFSSGQSSLPFSSQSAYTGQNPSGIIKG
QSSFATSSRAGGIQGTSSEPPSSIFMPNPSNMGQNPLSDIITKPSLVFGSPSLGVSFSET
PKPTELGNRKKRSLDAEAPAQSSFISSSAGQREEEFGGPSKRRSFQTFPHRQSSLQTAFG
RQEIIQKSSADSTQGSGNQFINTQADKSPTTKLKPKRLPSSSDQAAVVQSSVIVILDVPA
DLMSRDLLKKHFTGFGDVLRINLNPEKKTVTVAFRTHAGAARAKTEGEIISQEHAPLKIY
FKKMVRKSMEMKAGGKEALPPSTGFLRQMLMKPTAKMQSGKPHQPLTRMSSRKNFSKVQE
RVAKTIYAKTDEEKVNILEKIDVLLRKQVVRQTDHKKAITSKGTCPDMCPEKERYLRQQR
KLLHSYEMDGNGNVDHCKAIKEYSRSSADQEEPLPHELRPPHVLRMTMYFIFTNIIPKVE
EGQVADWYDFIWNRTRAIRKELTIQQINDPIAAEINEQCARFHILCSHHFCEEDSMVFDP
KINNENLEKTMKTILDLYREIYLTEQEKANDETLVNSNMAEFYSYYILLNINRTADVLYE
LQELPRVVRSSPMVELAVHAFYAIHNNNYAKFFKIVRDASYLQASGCIFHRYFSQVRRKA
ILTIARSFFQSADKKTVAFPVSILARVLCFNDMNELSMFCDHHSIWIGDDIVELQRSGYD
DQETTMVEVRSNLVMSKIGNRSLGEIVANCDISTRDMHEPYSSFDEDGRYIDEYASQLLS
DKQFQTQAALQVPSLTAASGGSFQGFSQVKTISPEEGKSKSSFAMKLPTGVTNTEVKIIA
KELFHEVISELVLELSKITHKTAQNLIQCKVIMDQVINDVIFIDARGIADDVIRGGIAEK
DARVAAELARQKKIESERNLKEKRDREEKEKRERTEREKEEMRREQSEEIASQLEHNVID
VIIKTIATETYKAEKDLLQRHRIKKFSEDELDSLLHGCMITWASEICNETVSEVRKKKHS
QIFLEIQTRKVERIFETWKKVKEAKIKFQAIKRTFPSMPHCRPVKEQIRNLLTDEETCFQ
ENSFRLNGKAELSIRSPMNIVGSRERLDRHITDSVAKLTELYGEAAKPLKFCDVISEMRL
GVIPDQGSSILWKILVYGPQIGDKDLSSWIYKRFLGEEKRMNKYKKVVNSEKGLSVEIEV
CCRNVTESFSCEEVMGSSGIVYLLPAPGSDPRDDLRKTAKMKFENFLSSIPEIPNLPLLI
VTLDWELGNEDIAVHLDLQESLISHRKVIQLASESDYILENDRKLQEGVRYLAEFAPIPP
TLISQSCKEFFEDELALRYITPMYKHLAHRQELDMSPLEASFQVDFYNFVVENLASLTNH
KDYMNISWPAPEFFSKNDITTADWNREENLILNYEAMLKCKVAEFPEIMAEADENEIMDI
LLKYAEKICPSCPQLQSIVQQRFKLECMMYNDSINLDSCDYEAESTLAQSVNFHQIVDSI
ISQHLTNILYHSDLGDRVLTYPHDTAELFRNSNYFAEKFGETEFFASNFETQTKPWKKRR
KSDAVKKKMENYVDVSRSRVVDVSWMCEESPKLDAEKNMTGFLADLEEEKKLSNDFEEKL
MTLSMEGEIPTTLGNVTLPRYHVSSLG*

Nucleotide sequence

Length: 5,304

>Haaura.CG.MTP2014.S539.g05626.01.t
ATGTCTTTCAATCCTCCAAATACTACAGCATCAATAAGCAGTGGAGTGTTCTCATCCACA
TTCACATCGCAGAAAGATGTGTTTGGTGCAAACAATTCAAGCAATGTATTTGGATTTGCT
CCTCCGTCTAGCAGCCAGACGAGATCAACCTTATTTGGATCGAGCCAAGCCCAAGAAAAT
GTGACTTTTAACCCTCCAAAGTCTTCTGTATTCATGGGAAGAACAGCCACCTTCACATCG
GCAGACCAGCAGGCAAATACGTCAGTTTTTGGTTCAGCACAGCAGAATAAAACTGCTCAA
ATGACTTCTGGGCAATCTTCTGTGTTTGGTCAAGGTTCATCAAGCTCATTTGGGGGAGCC
TCTACTGAATCGTCTTCCTCGATATTTATGTCTGATCTTCCAAGTGTTAATCAGAATCCC
TCGTCCAGCTTCCAGGGTGGGTCATCCTTTGCAAAATCTTTTTCTAGCGGGCAATCTTCA
TTGCCATTCTCGTCTCAGTCTGCATATACTGGGCAAAACCCTTCAGGCATCATTAAGGGA
CAATCATCATTTGCAACGTCCTCTCGTGCTGGTGGGATCCAGGGAACATCTAGTGAACCA
CCCTCATCAATATTTATGCCCAACCCTTCTAATATGGGCCAAAATCCACTATCAGATATC
ATTACAAAACCATCCCTTGTGTTTGGGTCTCCTTCCTTGGGTGTCTCATTCAGCGAAACC
CCCAAACCTACTGAATTAGGGAACAGGAAGAAAAGATCTCTAGATGCAGAAGCACCTGCT
CAATCCTCCTTCATTTCAAGCTCTGCAGGACAAAGAGAGGAAGAGTTTGGTGGCCCCAGT
AAAAGAAGATCATTTCAAACATTTCCACATCGGCAGTCTTCTTTGCAAACTGCTTTCGGG
AGGCAGGAAATCATTCAGAAGTCATCGGCTGACAGTACACAGGGATCCGGGAATCAGTTT
ATCAATACGCAAGCTGATAAATCTCCAACAACGAAACTAAAGCCAAAACGACTGCCATCC
TCATCTGACCAAGCTGCAGTTGTCCAGTCATCCGTGATAGTCATCCTCGATGTTCCTGCC
GATTTGATGTCCAGGGATCTTCTCAAAAAACATTTTACTGGGTTCGGGGATGTTCTCCGG
ATCAATTTAAACCCGGAAAAGAAAACTGTAACTGTCGCATTCAGAACTCATGCAGGCGCA
GCTCGTGCTAAAACAGAAGGCGAAATAATATCGCAAGAGCATGCTCCGTTAAAGATCTAC
TTCAAAAAAATGGTAAGGAAGTCAATGGAGATGAAAGCAGGTGGGAAAGAGGCTCTTCCT
CCAAGCACGGGATTCTTGAGACAGATGTTGATGAAGCCTACAGCCAAGATGCAGTCAGGT
AAACCTCATCAACCTCTTACAAGGATGAGCTCTCGGAAAAATTTCAGTAAGGTCCAGGAA
AGGGTGGCAAAAACGATTTACGCGAAAACAGACGAAGAGAAGGTAAATATATTGGAAAAA
ATCGATGTTCTCCTTCGGAAACAAGTTGTAAGGCAGACGGACCATAAAAAAGCGATTACC
AGCAAAGGTACATGTCCTGATATGTGCCCGGAAAAAGAAAGATATCTCCGTCAGCAGAGA
AAGTTACTTCATTCTTATGAAATGGACGGAAATGGGAATGTAGACCATTGTAAAGCTATC
AAAGAATATAGCAGGTCATCTGCGGACCAAGAAGAACCTTTGCCCCATGAACTACGACCT
CCTCATGTCCTACGCATGACAATGTATTTCATCTTCACCAATATTATCCCTAAGGTCGAA
GAAGGCCAAGTCGCAGATTGGTACGATTTTATTTGGAACCGTACAAGAGCGATCAGGAAA
GAACTCACGATCCAGCAAATAAACGACCCGATCGCAGCAGAAATCAATGAGCAGTGCGCA
AGATTTCATATTCTCTGTTCGCACCATTTCTGCGAAGAAGACAGTATGGTTTTCGACCCA
AAAATCAACAACGAAAATTTGGAAAAAACGATGAAAACGATACTGGATTTGTACAGAGAA
ATTTATCTAACTGAACAGGAGAAAGCAAATGACGAGACGTTGGTAAACTCCAACATGGCG
GAATTTTACTCCTACTATATTCTTTTGAACATCAACAGAACCGCAGACGTATTGTACGAG
TTACAAGAGCTCCCGCGCGTGGTTCGTTCATCACCGATGGTGGAGTTGGCTGTGCATGCT
TTCTATGCTATACACAACAACAATTACGCAAAGTTTTTCAAAATTGTCAGAGATGCATCC
TATCTACAGGCAAGTGGCTGCATTTTTCATCGTTATTTCAGTCAAGTAAGAAGGAAGGCA
ATTCTCACTATCGCACGATCCTTCTTTCAATCAGCCGACAAAAAAACTGTTGCATTTCCA
GTGTCAATACTTGCAAGAGTTCTCTGTTTCAACGACATGAACGAACTATCAATGTTCTGT
GATCATCATTCCATTTGGATTGGAGATGATATTGTTGAACTTCAAAGGAGCGGATACGAT
GATCAAGAAACGACAATGGTTGAAGTTCGTTCAAATCTTGTGATGTCAAAAATTGGGAAC
AGATCTTTGGGAGAGATTGTTGCAAACTGTGATATATCAACAAGGGATATGCATGAACCG
TATTCAAGTTTTGATGAAGATGGGAGATACATTGATGAGTACGCGTCTCAGCTTTTGTCA
GATAAACAGTTTCAGACACAAGCAGCGTTGCAGGTGCCGTCGTTAACGGCTGCCTCGGGT
GGTTCATTCCAAGGTTTCTCACAAGTCAAAACTATAAGTCCTGAAGAAGGGAAGTCGAAA
AGTTCCTTCGCTATGAAATTACCAACAGGAGTCACAAATACTGAAGTCAAAATCATAGCG
AAGGAACTTTTCCATGAAGTGATAAGCGAACTCGTTTTGGAATTGAGTAAAATAACACAC
AAAACAGCTCAAAATTTGATTCAGTGCAAGGTCATAATGGATCAAGTTATCAATGATGTC
ATATTTATTGATGCCAGAGGCATTGCCGATGATGTCATCAGAGGTGGAATCGCAGAAAAA
GATGCGAGAGTTGCTGCGGAGCTTGCACGGCAGAAAAAAATAGAATCCGAGAGGAATTTG
AAAGAGAAAAGGGACAGGGAGGAAAAAGAAAAAAGAGAGAGAACTGAAAGAGAGAAAGAA
GAAATGAGAAGGGAGCAGAGCGAGGAAATTGCATCCCAATTGGAACACAACGTCATTGAT
GTCATCATCAAAACTATCGCCACGGAAACATACAAGGCGGAGAAAGATCTGCTTCAGCGT
CATAGAATTAAAAAGTTTTCAGAGGATGAACTTGACAGTTTACTGCATGGTTGTATGATT
ACCTGGGCATCTGAGATTTGTAATGAAACAGTGAGCGAGGTTAGAAAGAAAAAGCACAGC
CAGATCTTCTTGGAGATTCAAACTCGCAAAGTAGAGCGAATTTTTGAGACATGGAAAAAA
GTAAAAGAAGCAAAAATCAAGTTCCAGGCGATAAAACGAACATTTCCAAGTATGCCGCAC
TGCCGTCCAGTCAAAGAACAGATCAGAAATCTTTTGACCGATGAGGAAACTTGCTTTCAA
GAAAACAGTTTTCGATTGAATGGAAAGGCTGAGCTTTCCATACGTTCACCAATGAACATC
GTGGGATCTAGAGAGAGGTTGGATCGTCACATTACTGATTCGGTGGCAAAACTGACTGAA
TTGTATGGCGAGGCAGCGAAGCCATTGAAATTTTGTGATGTCATCAGTGAAATGAGGTTA
GGTGTCATCCCGGATCAAGGGTCATCCATTCTGTGGAAAATTTTAGTTTATGGCCCACAA
ATAGGAGATAAAGATCTTTCTAGTTGGATATATAAAAGGTTCCTTGGCGAGGAAAAGCGA
ATGAACAAGTATAAGAAGGTCGTGAACTCTGAAAAAGGGTTGAGCGTTGAAATTGAAGTT
TGCTGTCGTAATGTAACGGAATCTTTTAGCTGTGAAGAAGTCATGGGAAGCTCTGGTATT
GTGTACCTACTTCCTGCTCCTGGTTCAGATCCTAGGGATGACTTACGGAAAACAGCTAAG
ATGAAATTCGAAAACTTTTTGTCATCCATACCGGAGATTCCCAATCTTCCTCTACTTATT
GTTACTTTGGACTGGGAGCTTGGTAATGAAGACATTGCAGTTCATCTCGATCTTCAAGAA
TCCCTCATTTCTCATCGCAAAGTCATTCAGCTTGCATCAGAATCTGACTACATCCTTGAA
AATGACAGAAAATTGCAGGAAGGTGTCCGATATTTGGCTGAATTTGCTCCGATCCCGCCA
ACTTTGATTTCACAAAGTTGTAAAGAGTTTTTTGAAGATGAATTAGCGTTACGATACATA
ACACCGATGTACAAACATTTAGCGCACCGGCAGGAATTGGATATGTCACCGCTAGAGGCG
TCGTTCCAAGTTGATTTTTATAACTTTGTTGTTGAGAATCTCGCAAGCCTCACGAACCAC
AAAGATTATATGAATATTTCGTGGCCTGCACCTGAATTTTTTTCTAAAAATGACATCACA
ACTGCGGACTGGAATCGCGAGGAAAACCTTATTTTGAATTATGAGGCCATGCTCAAATGT
AAAGTCGCAGAATTTCCAGAAATCATGGCCGAAGCGGACGAGAATGAAATCATGGATATA
TTGCTGAAATATGCAGAGAAAATTTGTCCCAGTTGCCCACAGTTACAGTCGATTGTACAA
CAGCGATTCAAGCTTGAATGTATGATGTATAACGACTCTATTAATTTGGACTCTTGTGAT
TATGAAGCTGAGAGCACGCTGGCACAGAGCGTCAACTTTCACCAAATTGTGGATTCGATT
ATAAGTCAACATCTCACCAATATTTTGTACCATTCGGATTTAGGGGACCGCGTACTCACG
TATCCTCACGACACTGCTGAGCTTTTCAGAAATTCAAATTACTTTGCTGAAAAATTTGGC
GAAACGGAATTTTTCGCATCCAATTTCGAGACACAAACAAAACCTTGGAAAAAACGGAGA
AAGAGCGATGCAGTGAAAAAGAAGATGGAGAATTATGTGGATGTTAGCAGGAGCAGGGTT
GTCGATGTGTCTTGGATGTGTGAAGAATCACCGAAGTTGGATGCCGAGAAAAATATGACG
GGATTTCTCGCTGACCTCGAGGAGGAGAAAAAACTAAGCAATGATTTTGAAGAGAAATTA
ATGACATTGAGTATGGAAGGAGAAATTCCTACTACATTGGGAAATGTAACATTACCAAGA
TATCATGTGTCTTCGTTAGGATGA

InterProScan

SUPERFAMILY
RBD_domain_sf (IPR035979) - T[343-406] 8.38E-7
Pfam
SAC3/GANP/THP3 (IPR005062) - T[523-826] 2.0E-96
Pfam
MCM3AP_GANP (IPR031907) - T[1323-1765] 7.7E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GANP_HUMAN 26.587 % 411 2.77E-117