Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S5...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S529.g05577.01.t

Possible name(s)

RDH11; RDH13

Gene model

Haaura.CG.MTP2014.S529.g05577

Location

S529 [18,678 / 19,946]

Sequences

Amino acid sequence

Length: 168

>Haaura.CG.MTP2014.S529.g05577.01.p
VQKLTGSSNVVLKSLDLTSLQSVRELAKDINGKEKRLDILINNAGIMKVPEGKTKDGFET
HFGVNHLGHFLLTNLLLEKIKENKSGRIITLSSLAHYFGKVHWDDLNVRKNYTGFTAYAQ
SKLMNAIFSVELSRRLITTVVNGGKHSQHEVKKTEKDFGKSVRNILG*

Nucleotide sequence

Length: 504

>Haaura.CG.MTP2014.S529.g05577.01.t
GTTCAAAAACTTACTGGATCGAGTAATGTCGTTTTGAAAAGTCTTGACTTAACATCGTTG
CAATCGGTCAGGGAACTTGCTAAGGATATAAATGGCAAGGAAAAACGTTTGGACATTCTA
ATAAACAATGCAGGCATTATGAAGGTACCAGAGGGAAAAACTAAGGATGGTTTCGAAACT
CATTTCGGAGTGAATCATTTGGGTCATTTTCTTTTAACAAATTTGTTACTTGAAAAAATA
AAGGAGAACAAGTCTGGTCGTATAATAACTCTTTCGTCACTTGCTCACTATTTCGGAAAA
GTACACTGGGATGACTTGAATGTACGGAAAAATTATACCGGGTTCACAGCCTATGCACAG
AGTAAACTTATGAATGCAATATTTTCCGTAGAGCTCAGTCGGCGCTTGATAACGACTGTG
GTAAATGGTGGCAAACATTCGCAGCACGAAGTGAAGAAAACGGAAAAAGACTTTGGGAAA
TCAGTGAGGAATATACTGGGCTGA

InterProScan

PRINTS	SDR_fam (IPR002347) - T[1-9] 1.1E-7 - T[35-46] 1.1E-7 - T[35-46] 6.3E-6 - T[80-96] 1.1E-7 - T[86-94] 6.3E-6 - T[118-137] 6.3E-6
Pfam	SDR_fam (IPR002347) - T[7-98] 6.6E-16
SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[8-136] 1.37E-30

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH11_HUMAN	52.206 %	132	3.11E-38
RDH13_HUMAN	58.4 %	127	2.87E-36
RDH14_HUMAN	48.551 %	125	2.51E-35