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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S224.g03454.01.t

Possible name(s)

RPL18A

Gene model

Haaura.CG.MTP2014.S224.g03454

Location

S224 [44,847 / 45,384]

Sequences

Amino acid sequence

Length: 179

>Haaura.CG.MTP2014.S224.g03454.01.p
MKAKGELREYKVVGRKLPSDAVPNPPLYRMRLFAPDHIAAKSRFWYYISYYKKIKKNAGE
ILQCSKISEKSPGRVKNFGIWLRYDSRSGSHNMYREYRDVKVASAVTQCYRDMGARHRAR
PGSIQIMKVEEVSSSKCRRSNIKQFHNSKIKFPMPRRVLSKSRQHAPRFTTNKPNLFF*

Nucleotide sequence

Length: 537

>Haaura.CG.MTP2014.S224.g03454.01.t
ATGAAGGCAAAGGGAGAGTTACGTGAATACAAAGTTGTTGGCCGTAAATTGCCATCAGAT
GCGGTCCCAAACCCTCCGCTTTATCGCATGAGGTTATTTGCACCTGATCACATCGCTGCA
AAGAGTAGATTTTGGTACTATATCTCGTACTACAAAAAAATCAAGAAGAACGCTGGCGAA
ATTCTTCAGTGTTCCAAGATATCTGAAAAATCTCCTGGTCGAGTCAAGAACTTCGGAATA
TGGCTGAGATACGATTCTCGTAGTGGAAGCCACAACATGTACAGAGAATATAGAGATGTG
AAAGTGGCGAGTGCAGTGACACAGTGTTACAGGGATATGGGTGCAAGACACAGAGCTCGT
CCTGGATCCATTCAAATTATGAAAGTGGAAGAAGTCTCGTCATCCAAATGCAGACGTTCT
AACATCAAGCAGTTTCACAATTCGAAAATCAAATTCCCTATGCCACGCCGGGTCCTAAGC
AAATCGAGACAACATGCTCCCAGATTCACTACAAACAAACCTAATCTGTTTTTCTAG

InterProScan

PANTHER
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[1-178] 7.8E-90
PIRSF
Ribosomal_L18a/L20_eukaryotes (IPR021138) - T[1-178] 1.1E-69
Pfam
Ribosomal_L18a//L18Ae/LX (IPR023573) - T[7-130] 3.0E-52
Hamap
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[30-130] 36.627

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL18A_HUMAN 71.91 % 275 5.35E-96