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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S177.g03015.01.t

Possible name(s)

BNC1; BNC2; SALL1

Location

S177 [68,504 / 73,163]

Sequences

Amino acid sequence

Length: 1,467

>Haaura.CG.MTP2014.S177.g03015.01.p
MSGHPMSLPTSFDRHNIVTSSPVSSLTETPPLHDTTNEMQCSYSPERNCVETISPLLMER
ERALDHDEASHNEQDSDVEQGYSCKSLMDEGTNCIDDHYASSDREEANAKDPTPKTKRDL
TQRKREEDQMENESDTDDGNPRDDQGFSYDAYSSDRDASSTGGYSLNHSRKRKRKSTNPS
RFSGNGETRNKLDKKDLSDEELEVYRNKNSKTSGNFITSDRANNSQDSISDVESYTDNEE
KSGKRPKYFPIGANDLSKQWEDFWSSKEAVRNPESIIKFDALLAFLKNQQHAAVALPFCS
PLDWINIKARLQMHMQENTKDIQEHKKEDQEMSSSEKKFSKSHNSNGAKENHCSSSEGVR
IPSGPYLGTKIESAMQQTRDEIQTDHEAPTLLVHSNDQNHTFNKTDCAEKEGDIVTCDAV
NQHTRKLGRSFSIPRSNTPCVNTAVKSSNSPSKFAEESYKDLSTKELHSSKEDQGKFRLR
RRPASAEPSQSEEPIAPGGRKFSLFLPTSPSRNSISDSKSDSHGDNQRRSLESPIPNVRT
SKSPTFFSQSSQKLDHIGLTGDLLARQSSMLPSKGIGHPSMPPVPLYSSVDCCTSLPGGE
IRSGVWIPTRSRNCHLCGKEFKNVYSVKLHIKNVHLKEMWQCTVGGCNATFPSKRSRDRH
SANANLHSKLRLRGLYADTGIRSQTKEMTDMLKERLLPAIFTASSLPKSGQHRNNSLGEN
YSLPNELKEEEMNRQVIKNDMRPHDFHPSDIRQHDSDRKEIATITEANMRKDKYSDSEKA
QKSKSMERGDHMQTANGNDKPLLRPNGINLSPDSTRKGFLNSEIENESIVRAKEFYIMYH
KLLTEAINMSAGLRGTEIANQLAGKLPIHPMYSLPGMNQNSVPSGFSPAMTTPLQLPLPF
SPGALSYARNDFMKSFGDHTPSLPIPNVYASIQNNHHRYSSEKMTQRESASESAVSPSRS
EKTFNYREGVIAPSRDSSHHGKKENRIPNELDEQKVRDKQHSTNDKQGTKYLRDMEYEKL
NKALQPQFKTEMQMFREQRDHPSMSSSIPVRPNNLFGTRDFAFPNAPNNFYPPFLPISGH
LSPGNRKSFNSFPHLPQNPNDRSLLFSEYMKSLQIPPAFSGLYFDPTKFHDQPGNSGKDS
NTGGSPVSDKSGEENECDRRLDRQLLVRGTGSGLKSDAHENSHRNSSRGSLESEDRSSVH
NTSKRNPTYDRTGNCEKQKVVTPSFSYPSTIVPSSHIQYSSGFSNEKDDFPVTSPARPWR
GLSAQYSGSSGLFRPGVLIPRNEHLQKPLGVPNPGPYFPPHPRNSNQSGMLMNAALMVAV
MARGKGQAPPIGSPCSGLNNPFPSFVPGMQDSNFSKHFGSEQEKKYAGKSLSEDDMLGPL
GSVTEFDDPTLGMEGNTWKTGPVQCNICKRMYSNKGTLRVHFKSVHLREMHRCTVPGCDM
MFTSVRSRNRHSQNPNLHRTLSYQQP*

Nucleotide sequence

Length: 4,401

>Haaura.CG.MTP2014.S177.g03015.01.t
ATGTCTGGCCATCCGATGTCCCTTCCCACGTCATTCGATCGTCACAACATAGTGACGTCA
TCACCAGTTTCTTCACTCACTGAGACACCGCCACTTCACGACACAACAAACGAAATGCAA
TGTTCCTACTCCCCAGAACGCAATTGTGTAGAAACAATATCACCGTTGCTCATGGAGCGT
GAACGAGCCCTTGACCACGATGAAGCTTCCCATAACGAGCAGGACAGTGATGTAGAACAA
GGGTATTCCTGCAAGAGTTTGATGGATGAGGGTACGAACTGCATCGATGATCATTATGCA
TCCAGTGATCGAGAAGAGGCAAATGCCAAGGACCCAACCCCGAAAACAAAACGCGACCTG
ACTCAGAGAAAAAGAGAGGAGGACCAGATGGAAAATGAGAGCGACACAGATGATGGAAAT
CCCCGGGATGATCAGGGATTCTCGTATGATGCATATTCATCTGACAGAGATGCTTCTTCG
ACCGGAGGTTACTCGTTGAATCATTCCAGAAAACGAAAAAGAAAATCAACAAATCCATCC
AGATTTTCAGGCAACGGTGAAACACGGAATAAACTGGATAAAAAAGACTTATCGGACGAG
GAGCTTGAAGTGTACAGAAATAAGAATTCGAAAACGAGCGGAAACTTCATTACATCTGAT
CGCGCGAACAACAGTCAGGATTCTATATCTGACGTCGAGAGCTACACTGATAACGAAGAA
AAATCAGGAAAACGTCCAAAATACTTTCCTATTGGGGCAAACGATCTTTCCAAGCAATGG
GAGGATTTCTGGTCTTCCAAAGAGGCAGTACGTAATCCCGAGTCAATTATCAAATTCGAC
GCATTGCTTGCATTTCTCAAAAATCAACAGCACGCGGCAGTGGCGCTTCCATTTTGTTCA
CCACTTGATTGGATTAACATTAAGGCCAGATTACAAATGCATATGCAGGAGAATACGAAA
GACATCCAAGAACATAAAAAAGAAGATCAGGAAATGTCTTCATCGGAGAAGAAATTTTCG
AAATCTCATAATTCTAACGGTGCGAAAGAAAACCACTGTTCTTCATCAGAAGGAGTGAGA
ATACCATCCGGTCCATATCTCGGCACGAAAATCGAGTCGGCGATGCAGCAAACGAGAGAT
GAGATTCAGACTGACCATGAAGCCCCAACTCTTCTAGTGCATTCTAATGATCAAAATCAT
ACATTCAACAAAACCGACTGTGCAGAGAAGGAAGGTGATATTGTGACATGCGATGCAGTT
AATCAGCATACTAGAAAACTCGGAAGAAGTTTTTCCATTCCACGTTCGAATACGCCATGC
GTGAATACAGCCGTTAAAAGTTCAAACTCTCCATCTAAATTTGCAGAAGAATCTTACAAA
GATCTTAGCACGAAAGAATTACATAGCAGTAAAGAGGACCAAGGGAAATTTCGACTGAGA
CGACGCCCAGCAAGTGCGGAACCGTCTCAGAGCGAAGAACCAATTGCTCCAGGTGGCAGA
AAATTTTCTCTCTTTCTACCGACTTCACCATCTCGTAATTCAATATCGGATTCTAAAAGT
GATTCGCACGGAGATAATCAGCGACGATCATTAGAATCTCCGATTCCAAACGTTAGGACT
TCCAAATCCCCTACGTTCTTTTCTCAATCCAGCCAGAAACTTGATCATATCGGATTGACA
GGCGATTTACTTGCGCGTCAGAGTTCTATGTTACCATCGAAGGGTATTGGTCATCCTAGC
ATGCCGCCGGTTCCCTTATATTCTTCAGTTGATTGCTGCACTTCTTTGCCTGGAGGGGAA
ATTCGAAGTGGAGTTTGGATTCCGACACGATCAAGAAATTGTCATTTGTGTGGCAAGGAG
TTCAAAAACGTGTACAGTGTGAAACTTCACATAAAGAATGTCCATTTGAAAGAAATGTGG
CAATGTACAGTGGGAGGATGCAACGCTACCTTTCCGTCTAAGCGTAGCAGAGATCGCCAT
AGCGCTAATGCTAATTTACACAGTAAACTTCGACTGAGAGGGTTATACGCCGATACCGGT
ATCCGATCCCAGACAAAAGAAATGACGGACATGCTGAAGGAACGGCTTCTCCCTGCAATT
TTTACCGCCTCATCTCTCCCCAAAAGCGGCCAACATAGAAACAATTCCCTAGGAGAAAAT
TACTCTTTGCCGAATGAATTAAAAGAGGAAGAAATGAATAGACAAGTGATCAAAAACGAT
ATGAGGCCACACGATTTCCATCCCAGTGATATAAGACAACATGATTCCGACAGAAAAGAA
ATCGCTACCATAACTGAAGCCAACATGAGGAAAGATAAATACTCGGACAGTGAAAAAGCT
CAGAAATCGAAGAGTATGGAGAGGGGCGACCACATGCAGACTGCAAATGGAAACGATAAA
CCTCTACTGCGCCCGAATGGAATTAACCTGTCGCCTGATTCGACTCGAAAAGGATTTCTC
AATTCCGAAATCGAAAACGAATCTATCGTTAGAGCAAAAGAGTTCTACATAATGTATCAC
AAACTACTAACGGAGGCAATCAATATGTCAGCAGGTCTCAGAGGCACTGAGATAGCAAAT
CAATTGGCAGGGAAGTTGCCTATTCATCCAATGTATTCATTACCTGGTATGAATCAAAAC
TCCGTTCCTTCCGGGTTCAGCCCAGCAATGACCACACCTCTTCAGTTACCGCTACCCTTC
AGCCCAGGAGCTTTATCGTATGCACGAAACGATTTCATGAAGAGTTTCGGGGATCACACT
CCATCCTTACCCATTCCGAATGTGTATGCCTCCATCCAAAACAACCATCATCGGTATTCC
TCTGAGAAAATGACGCAACGAGAAAGCGCGTCGGAAAGTGCAGTTTCGCCTTCTCGTTCG
GAGAAAACCTTCAATTACCGCGAAGGCGTTATAGCGCCATCTCGCGACAGTAGCCATCAC
GGGAAAAAAGAGAATCGCATTCCAAATGAGCTTGATGAACAAAAAGTTCGGGACAAGCAA
CATAGCACGAATGATAAACAAGGTACGAAATACTTGAGAGATATGGAATACGAGAAACTG
AACAAAGCTTTGCAACCTCAATTCAAGACTGAGATGCAGATGTTTCGTGAACAGAGAGAT
CATCCTTCTATGAGCAGTAGCATTCCAGTACGACCGAACAACTTGTTCGGTACTCGCGAT
TTTGCCTTTCCGAATGCACCAAATAATTTTTATCCTCCGTTTCTTCCTATTTCTGGGCAT
CTTTCTCCTGGCAACAGAAAATCCTTCAACAGCTTCCCCCATCTTCCACAAAATCCAAAC
GACAGATCTCTGCTTTTCTCAGAATACATGAAGTCATTGCAAATCCCGCCAGCATTCAGT
GGATTGTACTTTGATCCCACAAAGTTCCATGACCAACCTGGTAATTCTGGCAAAGACAGC
AATACAGGTGGAAGCCCTGTGTCTGACAAATCCGGTGAAGAGAACGAATGCGACAGAAGG
TTAGATCGCCAGTTACTAGTTCGGGGTACTGGTTCTGGGCTGAAGTCAGACGCGCATGAA
AATTCTCATCGAAATTCTTCTCGAGGAAGTTTGGAAAGTGAAGATAGGTCGAGCGTCCAC
AACACATCTAAACGCAACCCAACCTATGACAGGACTGGAAACTGTGAGAAACAGAAGGTG
GTTACACCAAGCTTCAGTTATCCTTCAACTATAGTTCCATCGTCCCATATTCAATATTCT
TCTGGCTTTTCGAACGAGAAAGATGACTTTCCAGTTACTTCGCCGGCGAGGCCTTGGCGG
GGTTTATCTGCGCAGTATAGTGGATCGTCGGGACTTTTTAGGCCCGGCGTGCTTATCCCG
CGTAACGAGCATTTACAGAAGCCTCTCGGTGTTCCAAACCCCGGCCCATACTTCCCACCG
CATCCGAGAAATAGCAACCAATCGGGAATGCTAATGAATGCAGCCCTTATGGTCGCCGTG
ATGGCTAGAGGCAAAGGTCAGGCACCACCCATAGGTTCACCGTGTTCAGGGCTAAATAAC
CCATTTCCTAGTTTCGTCCCAGGGATGCAAGATTCCAATTTTAGTAAACACTTCGGTTCG
GAACAGGAGAAAAAGTACGCGGGAAAGTCGCTATCAGAAGACGATATGTTGGGTCCGCTA
GGGAGTGTCACAGAGTTTGACGATCCGACTTTGGGAATGGAAGGCAACACTTGGAAAACG
GGACCGGTGCAATGTAACATATGCAAGAGAATGTATAGTAACAAAGGAACATTAAGAGTG
CATTTCAAATCGGTACATCTACGAGAAATGCATAGGTGTACTGTGCCTGGCTGCGACATG
ATGTTCACTTCGGTTAGAAGTCGAAACAGACATAGTCAAAATCCGAATTTGCATAGAACA
TTGTCTTATCAACAACCTTGA

InterProScan

ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[612-640] 9.619 - T[1403-1431] 9.577
SMART
Znf_C2H2_type (IPR013087) - T[612-635] 0.094 - T[640-667] 1.7 - T[1403-1426] 0.012 - T[1431-1458] 0.47
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[614-635] . - T[1405-1426] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BNC2_HUMAN 74.603 % 117 2.66E-26
BNC1_HUMAN 65.574 % 106 6.83E-23