- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1155.g07751.01.t
Possible name(s)
BARHL1; BARHL2; GBX2
Gene model
Location
S1155 [1,531 / 3,032]
Amino acid sequence
Length: 417
>Haaura.CG.MTP2014.S1155.g07751.01.p
MNSSEIECNDTEIISSSSEKSPTVTSPSMNSFDMTLGNESRNEKYKGLSNSPTSMEIKKR
PRTAFTPEQIKRLESEFQRNKYLSVGKRMELSKALKLTETQIKIWFQNRRTKWKREYLSE
WEVWAHQNYYAMHGLYGAAAAASALAAVSNVAVAAAGTPGIQRSPPMHPAMMSAHGVNGF
TGSPFPDPLTSSLKGVPGAYNHSPLIFPNPMMSHSPHSRLPPQMQLSSPPPPAKPSPIMA
SRLAAAGQTMPPLHPSSQPMLPQLPYYFFPGQMYAAAVAANQQAPVMPGDPSGAFTDRWT
STSSTSSSPTSHETSFGTPIVNSPVTFNGTKLSPQVLHNRTSSDISSNFKTSVNAVLCGT
KPSRLMLPNLPNGHSSMSLGRWAGVRGIKSPAVATDQNNNHSTPFAHDNDIISTPT*
Nucleotide sequence
Length: 1,251
>Haaura.CG.MTP2014.S1155.g07751.01.t
ATGAATTCTAGCGAAATCGAATGCAACGACACGGAAATTATTTCTTCGTCGTCTGAAAAA
TCGCCTACGGTGACGTCACCGTCCATGAATTCATTCGATATGACGTTGGGTAACGAGAGT
CGCAACGAGAAGTATAAAGGTTTGTCAAATTCTCCGACATCCATGGAGATTAAAAAACGC
CCTCGCACGGCGTTTACCCCAGAACAGATCAAACGATTGGAATCTGAATTTCAACGCAAC
AAGTATCTGTCCGTTGGCAAGCGAATGGAGTTGTCAAAGGCTCTGAAACTTACAGAAACT
CAGATCAAAATATGGTTCCAAAATCGACGAACAAAATGGAAACGGGAATACTTGAGTGAG
TGGGAGGTTTGGGCACATCAGAACTATTATGCAATGCACGGTCTATACGGGGCAGCTGCG
GCGGCGTCTGCGTTGGCCGCGGTGTCGAACGTCGCTGTTGCCGCTGCTGGCACTCCAGGA
ATACAAAGATCTCCACCGATGCACCCTGCTATGATGAGTGCACACGGGGTAAATGGGTTT
ACAGGATCCCCTTTTCCTGATCCACTGACCAGCTCGCTTAAAGGGGTTCCAGGAGCGTAC
AACCATTCGCCACTTATATTCCCTAACCCAATGATGTCCCATTCACCCCATTCGCGTCTC
CCACCGCAAATGCAACTGTCTTCTCCACCACCGCCTGCCAAACCAAGTCCAATAATGGCA
TCTAGGCTAGCGGCTGCCGGTCAAACCATGCCGCCATTACATCCGAGTTCACAACCCATG
CTTCCACAACTTCCTTACTATTTCTTTCCTGGGCAAATGTATGCGGCGGCAGTGGCAGCT
AATCAGCAGGCACCAGTGATGCCAGGTGATCCGAGCGGTGCTTTTACCGATCGCTGGACG
TCAACCTCGTCCACCTCGTCGAGTCCTACGTCACACGAAACAAGCTTCGGGACACCTATT
GTAAATTCACCAGTAACGTTCAATGGCACCAAACTATCTCCCCAGGTTCTTCATAACAGA
ACTTCGTCAGATATATCCTCAAACTTCAAAACCAGCGTTAACGCCGTACTGTGTGGTACC
AAACCGTCTCGCCTAATGCTACCCAATCTTCCTAATGGTCACTCATCGATGTCTTTAGGA
CGTTGGGCCGGAGTAAGGGGTATAAAAAGTCCGGCGGTTGCAACCGATCAAAACAATAAT
CATTCAACACCATTTGCACACGACAACGATATTATTTCAACTCCAACGTAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[51-116] 5.13E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[56-116] 21.686 |
| SMART |
Homeobox_dom (IPR001356) - T[58-120] 1.0E-26 |
| CDD |
Homeobox_dom (IPR001356) - T[59-116] 1.42543E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[59-115] 1.3E-22 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[80-91] 2.9E-7 - T[95-105] 2.9E-7 - T[105-114] 2.9E-7 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[91-114] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GBX2_HUMAN | 56.522 % | 86.3 | 1.2E-18 |
| BARH1_HUMAN | 47.674 % | 91.7 | 1.57E-20 |
| BARH2_HUMAN | 36.875 % | 90.5 | 6.74E-20 |
