- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chrUn.g69057.01.t
Possible name(s)
VPS36
Gene model
Location
chrUn [392,847,112 / 392,851,061]
Amino acid sequence
Length: 304
>Boschl.CG.Botznik2013.chrUn.g69057.01.p
GFSRSPKVTLHLSKRSQDQAAGPVAHSNNNLIRFAFKSGGDIEFHRALGQAIQAKAWERS
SKSSKRQVRGRGIVGIERKIEQRRQDAEQNISVAFQDLSNLMDKAKEMVGLSQAISSKIK
DKQGDITEDETVKFKSYLLSLGIPNPVTKETHGTGTHYHMQLAREVSDAMIPILQKQDGI
ALLSDAYCMINRARGLELVSPEDLLNACKMFHPMKLPVRMKTFDSGVTVIQLEAHSEERM
VSQTIALVDDSVSLSAQQLADLLQISVFLAKERLILGEKMGKLCRDESIEGLRFYPNRFM
ELTT
Nucleotide sequence
Length: 917
>Boschl.CG.Botznik2013.chrUn.g69057.01.t
AGGATTCAGTCGTAGCCCGAAGGTGACACTTCATTTATCGAAACGCAGCCAAGACCAAGC
GGCCGGTCCGGTCGCTCACTCCAACAACAACTTGATTAGGTTTGCTTTCAAAAGCGGGGG
CGATATCGAGTTCCACCGAGCCCTGGGTCAAGCGATACAGGCCAAAGCGTGGGAGAGGAG
CTCCAAAAGTTCAAAACGACAAGTCAGAGGTCGTGGAATTGTCGGTATCGAACGTAAAAT
AGAACAGAGACGACAGGACGCGGAACAAAATATTTCTGTCGCGTTCCAAGATTTATCCAA
CCTGATGGACAAGGCCAAAGAAATGGTCGGGCTTTCGCAAGCAATATCTTCCAAAATCAA
AGATAAACAAGGAGACATCACAGAAGACGAGACTGTCAAATTCAAATCGTATTTGTTGAG
TCTGGGAATCCCGAATCCTGTCACGAAAGAGACTCACGGTACAGGGACGCATTATCACAT
GCAACTAGCAAGAGAAGTTAGCGACGCGATGATTCCAATCTTACAAAAACAGGACGGTAT
AGCTTTGCTAAGCGACGCTTATTGCATGATAAATCGCGCTCGTGGTTTGGAACTCGTGTC
TCCCGAAGATCTTTTAAACGCTTGCAAGATGTTCCATCCCATGAAGCTACCCGTTCGTAT
GAAAACGTTTGACAGCGGCGTTACTGTGATCCAGCTGGAAGCTCACAGCGAGGAGAGGAT
GGTTTCACAGACGATCGCGTTGGTCGATGATAGCGTGTCGCTTTCCGCGCAGCAGCTAGC
TGATTTACTGCAAATTTCGGTGTTTCTGGCTAAGGAACGACTGATTTTGGGAGAGAAAAT
GGGGAAGTTATGTAGAGACGAAAGTATTGAAGGGTTACGGTTTTACCCGAACAGATTTAT
GGAGCTTACAACATGAT
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1-64] 8.6E-15 |
| ProSiteProfiles |
GLUE_dom (IPR021648) - T[1-64] 11.939 |
| PANTHER |
Vps36 (IPR037855) - T[2-301] 1.0E-109 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[106-227] 4.9E-7 - T[194-302] 9.11E-28 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[154-233] 3.6E-32 - T[234-302] 2.7E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS36_HUMAN | 52.751 % | 349 | 5.85E-120 |
