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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chrUn.g52742.01.t

Possible name(s)

SNX11; SNX12; SNX3

Gene model

Boschl.CG.Botznik2013.chrUn.g52742

Location

chrUn [322,710,182 / 322,713,845]

Sequences

Amino acid sequence

Length: 222

>Boschl.CG.Botznik2013.chrUn.g52742.01.p
EFITVHVGDAEIRTTKTDKYSIYSVTLKTNSLSFSAPHTRVYRRYSDFLWLQRRLKKIPK
LTSSCRVPNMPPKQFSFWNFDKDFLHGRKQSLQEFLKRIMEETLFLSSTAFHLFIQTEIP
VPEMEEVIAKGCSDAAIAENLMSVEVDNKFVESLQANVRHSRDSEHSPSVKARDISKGRC
PVYWRCRENTMNKVASLPHFSTLLRQCRGSDGNDADTDKSAA

Nucleotide sequence

Length: 669

>Boschl.CG.Botznik2013.chrUn.g52742.01.t
GGAATTCATCACAGTGCACGTAGGCGATGCGGAAATAAGGACCACCAAAACGGACAAATA
TTCGATATATTCCGTTACATTGAAGACAAACAGCTTATCCTTTTCGGCGCCTCACACGCG
TGTTTATAGAAGATACAGTGACTTTTTATGGCTCCAGCGTCGTTTGAAGAAGATACCTAA
GTGAACCAGCAGCTGCAGGGTTCCCAACATGCCACCAAAACAGTTTTCGTTTTGGAATTT
CGACAAAGACTTTCTACACGGAAGAAAACAATCATTGCAGGAATTTCTAAAGAGAATCAT
GGAAGAGACGCTATTCCTATCGAGTACAGCGTTTCATCTCTTCATCCAGACTGAAATCCC
CGTACCAGAAATGGAAGAGGTCATCGCAAAAGGTTGTAGTGACGCAGCAATCGCCGAAAA
TTTGATGTCAGTCGAAGTTGACAATAAATTTGTGGAATCGCTGCAAGCAAATGTTCGACA
TTCGCGTGACTCGGAACACTCGCCATCTGTAAAAGCTCGCGATATATCGAAAGGTCGATG
TCCTGTGTACTGGCGTTGCAGGGAAAACACGATGAACAAAGTTGCGAGCTTGCCACACTT
CAGCACCTTATTGAGACAGTGCCGCGGTAGCGATGGCAACGACGCTGACACCGATAAATC
TGCGGCATG

InterProScan

ProSiteProfiles
Phox (IPR001683) - T[1-121] 16.164
PANTHER
SNX11 (IPR028655) - T[1-149] 5.6E-28
SMART
Phox (IPR001683) - T[1-118] 7.7E-12
Gene3D
PX_dom_sf (IPR036871) - T[1-148] 1.0E-31
Pfam
Phox (IPR001683) - T[2-117] 5.5E-20
SUPERFAMILY
PX_dom_sf (IPR036871) - T[2-117] 2.49E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX11_HUMAN 32.215 % 90.9 4.74E-22