Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Harore.CG.MTP2014.S6...'

Transcript Model

Transcript Id

Harore.CG.MTP2014.S67.g14265.01.t

Possible name(s)

RAB18; RAB2A; RAB2B

Gene model

Harore.CG.MTP2014.S67.g14265

Location

S67 [152,917 / 154,933]

Sequences

Amino acid sequence

Length: 219

>Harore.CG.MTP2014.S67.g14265.01.p
EHLYVFRNKKKHCKMDEELLTTLKILIIGESGVGKSSLLLRFTDDKFDPDQPATIGVDFK
VKAITVDGNMVKLALWDTAGQERFRTLTPSYYRGAQGVIFVYDCTRADTFSRIGAWMTEL
ETYATKPNVVKMLVGNKIDKDGRLVQRDEGLKFARKHAMLFIEASAKTKDGVQCAFEELV
EKIIQTPGLWEKDGQKGGGSFSVGGSNAQPQGMCGCSLI

Nucleotide sequence

Length: 1,083

>Harore.CG.MTP2014.S67.g14265.01.t
AAGAACACCTCTACGTATTCCGAAACAAAAAAAAACATTGCAAAATGGACGAGGAATTAC
TAACTACGTTGAAAATATTGATTATCGGCGAAAGTGGCGTTGGAAAATCAAGTTTGCTGC
TGAGGTTCACAGATGACAAGTTCGACCCAGATCAGCCTGCAACTATTGGTGTTGATTTTA
AGGTGAAAGCTATCACTGTCGATGGTAACATGGTCAAGCTCGCATTGTGGGATACTGCAG
GACAGGAAAGGTTCAGAACTCTCACACCCAGCTACTATAGAGGAGCACAAGGCGTTATTT
TTGTTTATGATTGCACCAGAGCTGACACTTTCTCCAGAATTGGTGCATGGATGACGGAAT
TAGAAACATATGCCACTAAACCAAATGTTGTCAAAATGCTTGTTGGAAACAAAATAGACA
AGGACGGAAGACTAGTCCAGAGAGACGAGGGTTTGAAGTTTGCACGGAAACATGCAATGC
TTTTCATTGAAGCCAGCGCAAAGACTAAAGACGGTGTCCAGTGTGCTTTTGAAGAACTCG
TTGAAAAAATCATTCAGACCCCTGGCTTGTGGGAAAAAGATGGACAGAAAGGCGGAGGCT
CCTTTTCTGTCGGAGGTTCGAATGCACAGCCGCAGGGAATGTGTGGTTGTAGTTTAATAT
GAAAACAAATCAAAACAATCCATTAAAACTTGATGAATATAACCAGCGAACAAGTATTAA
GACATACCTTCGAATATGTGTTGAATACCGTGATGTACACGAAGATGAAAAGACAGATGA
ACTTACACTGAACTTGAATAAGAAAATAATACAGTTTTGCAATAATTATCCATCAAACAA
ATGTGTATTTCTAATTAATTCTTGCCTTCGGCTACCCCTCTAAGTATATTGTATTCAGTG
GAAAACATGAGGTTAGTTTGTAGTAAAAAGAAGATTGGGGTAGTGATGTATCAAATAGAT
TTATCCACTTTTTATGAATTTTTACTCAACAGAATGACATAAATTTGTTAAGATACTGTA
TAACACAAGAATATAGTTAACTGGAATAGGTTTCAGCTGAAGATGTAAACTTAATTGTGA
GAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[20-188] 6.42E-55
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[22-178] 1.3E-31
Pfam
Small_GTPase (IPR001806) - T[24-184] 2.0E-54
ProSitePatterns
Sigma_54_int_dom_ATP-bd_1 (IPR025662) - T[25-38] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAB18_HUMAN 77.66 % 304 3.58E-106
RAB2A_HUMAN 46.961 % 169 7.45E-53
RAB2B_HUMAN 46.409 % 165 1.85E-51