- Transcript 'Harore.CG.MTP2014.S6...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S667.g09073.01.t
Possible name(s)
SOCS6; SOCS7
Gene model
Location
S667 [25,996 / 30,778]
Amino acid sequence
Length: 518
>Harore.CG.MTP2014.S667.g09073.01.p
MNPSLNLVFSLASDMMTYFSENMNSFPAEGDVVGVSTRRKIIGESRTSNRDSELSREEQT
CPSKELHSENQDIRSKYERHIYHDIRDVRDEIMCEKKIKKQFLPGEKPEIPPKPFRYVLR
DKRSRHVYQTIDLTPSQPTEAEKESPPPLPIKPKHLVKLADIPPPLPPRVVNSHALQQRH
KLNKEYLEHLRKSLDDNLLELVDEGDLPAEILNSEISGSNCIFNEQSVNSVAHDRAIACL
ENSENSLHIQNGLSTESSLAKDYNSIDSCIGNITNPLLSEHHTALLRNSAALRNTLPTER
SQQALLVRNLALLKRCGWYWGNMTWQEAESLLLQKEEEDCTRKEPGKLKLARESNSVYFE
QFDSGNIGFGGVFLMRDSQNPLHLLTVTVRSAINTIHHIRVEYLNGKFQLYEPGRSVSRS
AAQCVRHANVAQFIQLAMRHSLSGSFLYFVKPKNMGEPPIQIRLMTPVSRFSKVKSLQYV
CRLTIRQHILGNSIDALSVPQKLKDYLMAATYYDPSEN
Nucleotide sequence
Length: 2,674
>Harore.CG.MTP2014.S667.g09073.01.t
ATGAACCCTTCGTTAAATTTAGTGTTTTCATTGGCATCTGATATGATGACCTACTTCAGC
GAAAATATGAATAGTTTTCCAGCTGAAGGTGATGTAGTTGGAGTAAGTACAAGAAGAAAA
ATTATTGGTGAATCAAGGACATCCAACAGAGATTCTGAACTATCCCGAGAAGAGCAAACA
TGTCCTTCAAAAGAACTGCATTCTGAGAATCAGGATATTAGAAGTAAATATGAAAGACAC
ATTTACCATGATATTCGAGATGTAAGAGATGAAATCATGTGCGAGAAGAAGATAAAAAAG
CAATTTTTACCCGGCGAGAAACCTGAAATACCTCCCAAACCATTCAGATATGTGCTTCGT
GATAAACGTTCCAGACATGTTTATCAAACGATAGATTTGACACCCTCCCAACCGACGGAA
GCTGAAAAGGAATCCCCTCCACCATTACCAATCAAACCTAAGCACTTGGTGAAGCTAGCG
GATATACCCCCACCACTTCCACCACGTGTTGTAAATTCTCACGCCCTACAGCAACGGCAT
AAACTAAACAAAGAATATCTTGAGCATTTGCGCAAAAGCCTTGATGACAACTTACTAGAA
TTAGTAGATGAAGGGGATCTACCTGCTGAAATACTGAATAGTGAAATATCAGGCAGTAAT
TGTATTTTCAATGAGCAAAGTGTGAACAGTGTTGCTCACGATCGCGCAATTGCATGTCTC
GAGAATTCAGAGAATTCACTTCATATTCAAAATGGTTTAAGTACTGAATCGTCTTTAGCA
AAAGACTACAATAGCATTGATTCTTGCATTGGGAACATAACCAATCCTCTGTTAAGCGAG
CATCATACTGCATTGCTAAGAAATTCAGCTGCTCTCAGGAATACGCTTCCAACGGAAAGA
TCACAGCAAGCTCTTTTAGTCAGAAACCTGGCTTTGCTTAAAAGATGTGGATGGTATTGG
GGTAACATGACATGGCAGGAAGCTGAATCGTTGCTGTTACAAAAAGAAGAGGAAGACTGC
ACTAGAAAAGAGCCAGGAAAACTAAAGTTAGCACGAGAGAGTAATTCGGTTTACTTTGAA
CAATTTGACTCTGGGAATATTGGGTTTGGAGGAGTATTTCTGATGCGTGATAGTCAAAAT
CCTCTTCATCTTCTCACAGTCACTGTACGATCAGCTATAAACACTATTCATCATATTCGA
GTGGAATACCTGAACGGGAAGTTTCAACTCTATGAGCCAGGAAGAAGTGTAAGCAGGAGT
GCAGCACAATGTGTTCGGCATGCTAATGTGGCTCAGTTTATCCAATTGGCAATGAGGCAT
TCTTTATCAGGAAGCTTCCTTTATTTTGTCAAGCCGAAGAATATGGGCGAACCACCTATA
CAAATCAGACTAATGACGCCAGTATCACGGTTTTCCAAGGTGAAATCACTGCAGTATGTC
TGTCGCTTGACTATTAGACAACATATCCTTGGAAACTCAATAGATGCGCTAAGTGTTCCA
CAAAAGCTAAAAGATTATTTAATGGCTGCTACATATTACGATCCTAGTGAAAACTAAAAA
TATTTTCAATTGCTGTTGGAAGTTTATTGCCTTTTAAAAAAATTGATGCAATGTATTCGT
TAACATGCTTTTTAATTTCATTTGTGCAATATTCTCCTACTGTAATAATATGACAGTTCA
ACAACTGGACATTAATTTTACAGCAGTCAAGTTTTAAATTTTTAGATTATTTGGAATACA
GTTCTGCTATCCCATGATAAATCTGTCATGGTCAATCTGTCATTGCTCTCCACATTCTTT
AAAAACATTTTGATATGATCCTTGGTTGTATGCCTTTTTAATAAGCATACATAAATACAT
ATTATCGTAATTTATTTCATATGAGGATTAAACGTGTTAAAACGAAGGAACAATACAGTG
GCCTCACATTACGAAATGGGATATGATATTTCATTGTGCAAAAGAGCCTCAATTCGCTGA
AATGCATTGTGCATTTTTCTGCGTGTTTGACTGACTTTCTGTTGCCTCGTCATAATCATT
GTTTGCAGATGCAGAATATAATTGAATGGATTAATTCATACTGTGACAGTCCACTGTACA
AGAATTTTTCACTTGGTTGTAAATGAAATTCACTATAAGTACTGTGTCGCTAAGGATGAT
GTGGAATCTTTCATCAAAAGTTTTTCTATCATAAATGTTTCTTTCCCCAAGTAGAATGAA
GAAGAGATAAATAACCTAGTAAAGAATAAAGAGTATTGAGTTATTATAGTATATTGTTAT
ATTATGCAAACAACTGTTCAAAAACAGCTATATAAAAATGGTCGTACTACAAATTAATGT
TATATTGAACCTATCAGGGTTAGCACAAAAGTACTTGGTGCTCTTATGCGAACTGTAGTT
TTGCACTCACCATGGCCTTAAATAAATTTTTGTACTGTCCAGCTTATTCAATACTTTTAG
TATTTGCCTGTTTATTTTTTCATTCAAATAACTATTATTGGCTATAGTGAATGAAGCATG
TGGTCATAATTTCCTATGTGTAAGGTGCATTCTTTAAAAAAATTCGAATTTCAATTGTCT
TATATACTGTGAATTTACTAGTTATCTTAATTTTTCGAACTTCGTTTTCAATGTTTTTGT
CACGAAATACAATAATCAACTGAGTGTTTTCCGG
| PANTHER |
SOCS7 (IPR028423) - T[133-150] 2.0E-33 - T[291-335] 2.0E-33 - T[371-517] 2.0E-33 |
| Gene3D |
SH2_dom_sf (IPR036860) - T[292-342] 2.0E-6 - T[369-516] 2.1E-22 |
| SUPERFAMILY |
SH2_dom_sf (IPR036860) - T[307-337] 8.85E-13 - T[371-467] 8.85E-13 |
| SMART |
SH2 (IPR000980) - T[316-443] 2.3E-6 |
| ProSiteProfiles |
SH2 (IPR000980) - T[318-468] 12.169 |
| ProSiteProfiles |
SOCS_box (IPR001496) - T[463-513] 14.12 |
| SUPERFAMILY |
SOCS_box-like_dom_sf (IPR036036) - T[464-511] 2.09E-9 |
| SMART |
SOCS_box (IPR001496) - T[468-511] 7.7E-8 - T[474-510] 2.9E-6 |
| Pfam |
SOCS_box (IPR001496) - T[474-508] 5.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOCS6_HUMAN | 32.85 % | 103 | 1.44E-23 |
| SOCS7_HUMAN | 33.784 % | 130 | 3.03E-32 |
