- Transcript 'Harore.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Harore.CG.MTP2014.S396.g10210.01.t
Possible name(s)
SFSWAP
Gene model
Location
S396 [22,714 / 37,917]
Amino acid sequence
Length: 896
>Harore.CG.MTP2014.S396.g10210.01.p
MRMYRYDARASLHDLSEFDGDSWNKQYQVSEEEHRIEALCDQERYMALHTNIAEENIHHE
EELKRLHASIAASEDNTSFNEVGLIYEDSKLSEAQQYDPSNPTIDEEVSDPDGKEETPFM
APASLAIPSDMEIPPTEKMHAIIEKTALFVSKQGAQMEIVLKAKQSNNTQFQFLLFDHYL
NPYYKHMPPTEKMHAIIEKTALFVSKQGAQMEIVLKAKQSNNTQFQFLLFDHYLNPYYKH
MVKRIKEGKYTPGISNKKNEDDNDEDSDDSSDDGGGYLHPSLLAGSSEKRKQRMEENREK
FKAIQKVDPDHPLAKLIEKGKRANALRQYAMMQQSTKMQAVTNQVADSNVPPVKPTVSTD
NKIPTTIVHPPPVMQSHSIAHVDTLTPIVPPPPDIQPMVDSVAKQIAEDGEEVERSMCAR
DDPMLSFLLPWHELYPYYSFRKSFFQQRLQNQRNIESHPDISGDKDKDSSSEIKAETENN
NVDYKPEKSAPISFAIKPKKESTNKPGVLNASKCLQILDDESDNEEENVQPSNDNEDLND
SKMETVNGLAESNSFSQPVSTCANEDKGCSVEDANGLETVNEDLNSQTKEMLPSVKKIDA
FKPAVSSFAVVTPSGTTASLSNLREKQAARRQKAMLFLKMKNDIPSNMESAPKPLTAVAS
EDIFDIEEDAASPVNNTPSATDDTPQDTSASLLKIDQQLATKRSVPPSTAPSSTLKDLVA
AASSRSNTPNSLSVSVRKDEDRSRSRSRSRYSSPSHTSRKRRSRSGSHDLANLPSSYRKT
RSPPRKERSSSRDRQRSHKRHRHDDRESKHRKKDSSSSLSRKSKKHSSKSKKKHKKKEKQ
KSKKRKSKTREDSYEEGERRTSSSDEASSVENHTNYNETPLTTDVKENNESGIEST
Nucleotide sequence
Length: 2,691
>Harore.CG.MTP2014.S396.g10210.01.t
ATGCGTATGTATAGATACGATGCAAGAGCTTCTTTGCATGACCTATCTGAGTTTGATGGA
GACTCTTGGAATAAACAATATCAGGTGAGTGAAGAAGAGCATAGAATAGAAGCCCTGTGT
GACCAAGAGCGATATATGGCATTGCACACAAACATTGCTGAAGAAAACATACATCATGAG
GAAGAACTGAAACGTCTGCATGCATCCATAGCAGCAAGTGAAGACAACACTTCCTTCAAT
GAAGTCGGTCTAATTTACGAAGATTCGAAGCTATCTGAAGCGCAGCAGTACGATCCGAGT
AATCCAACAATAGATGAAGAAGTCAGTGATCCTGATGGAAAAGAGGAGACTCCATTCATG
GCACCTGCATCTCTTGCCATTCCTTCTGATATGGAAATTCCTCCAACTGAGAAGATGCAT
GCTATAATCGAGAAGACAGCTTTGTTCGTTAGCAAGCAAGGAGCACAGATGGAAATTGTT
TTGAAAGCCAAGCAATCCAACAACACTCAATTTCAATTTCTGCTGTTTGATCACTACCTT
AATCCGTACTACAAGCACATGCCTCCAACTGAGAAGATGCATGCTATAATCGAGAAGACA
GCCTTGTTCGTTAGCAAGCAAGGAGCACAGATGGAAATTGTTTTGAAGGCCAAGCAATCC
AACAACACTCAATTTCAATTTCTGCTGTTTGATCATTACCTTAATCCGTACTACAAGCAC
ATGGTAAAGAGAATAAAAGAAGGCAAATATACACCTGGTATAAGTAATAAGAAAAATGAA
GATGATAATGATGAGGATTCTGATGACAGTAGTGATGATGGTGGTGGATATCTGCATCCG
AGCTTGCTTGCCGGTTCAAGCGAGAAACGGAAACAGCGAATGGAAGAAAATAGAGAAAAA
TTCAAGGCCATTCAGAAAGTTGATCCTGATCATCCACTTGCCAAGTTGATCGAGAAGGGC
AAAAGGGCCAATGCTTTGAGACAATATGCGATGATGCAGCAGTCTACAAAGATGCAGGCA
GTTACAAATCAAGTTGCAGACAGCAATGTTCCACCAGTAAAACCAACTGTGAGTACTGAT
AACAAAATTCCAACTACTATTGTGCATCCACCACCAGTCATGCAGTCTCATAGCATTGCT
CACGTTGATACGCTGACTCCAATCGTTCCACCTCCTCCAGACATACAGCCAATGGTTGAT
AGTGTTGCAAAGCAAATCGCAGAAGATGGTGAGGAAGTCGAGAGGAGTATGTGTGCAAGA
GACGATCCTATGTTATCTTTTCTCCTGCCTTGGCACGAATTGTATCCATACTACAGTTTT
CGGAAAAGTTTCTTCCAGCAGCGGTTACAGAATCAAAGGAATATTGAATCTCATCCTGAT
ATATCCGGTGATAAAGATAAAGATTCATCTAGCGAAATAAAAGCCGAGACTGAAAACAAT
AACGTTGACTACAAACCGGAGAAATCAGCACCCATAAGCTTCGCTATCAAGCCAAAGAAA
GAAAGTACTAATAAACCTGGTGTACTCAATGCATCTAAATGTCTGCAGATTCTTGATGAT
GAAAGCGACAACGAAGAAGAGAATGTTCAGCCAAGCAATGATAATGAAGACCTCAACGAT
TCCAAGATGGAAACAGTAAATGGTTTAGCAGAATCAAACTCCTTTTCCCAGCCTGTATCT
ACTTGTGCCAATGAAGACAAAGGTTGTTCTGTTGAAGACGCTAATGGATTAGAAACAGTG
AATGAAGACCTCAATTCTCAAACAAAAGAGATGCTTCCTTCTGTTAAAAAAATTGATGCT
TTCAAACCTGCTGTCTCTAGTTTTGCTGTCGTGACTCCAAGTGGCACCACTGCCTCTCTT
AGCAACCTTCGTGAAAAGCAGGCTGCTAGAAGACAAAAAGCCATGCTCTTCCTTAAAATG
AAGAATGATATTCCATCTAACATGGAGAGTGCACCAAAACCTCTTACTGCTGTTGCTTCT
GAAGATATTTTTGATATTGAAGAAGACGCCGCATCTCCGGTCAACAATACTCCTTCTGCT
ACTGACGACACACCTCAAGATACTTCAGCATCTTTGTTAAAAATAGATCAGCAACTCGCC
ACAAAAAGATCGGTACCACCTTCTACCGCACCGTCATCAACACTAAAAGATTTGGTTGCT
GCCGCGTCTTCCCGATCGAACACCCCTAACTCACTATCTGTTAGTGTAAGAAAGGATGAA
GACAGGAGTCGAAGTCGCTCTCGATCTAGGTATTCGTCACCTTCCCACACAAGTCGAAAA
CGACGCTCAAGATCCGGTAGTCATGACCTTGCAAATCTTCCTTCCTCCTACAGAAAAACA
AGATCGCCTCCCAGGAAAGAACGCTCGTCCTCAAGAGATCGACAGAGAAGCCATAAACGT
CATCGCCATGATGACAGGGAAAGCAAGCACCGTAAAAAAGATAGCAGTAGTTCCCTGTCA
CGTAAGTCCAAAAAGCATAGTTCCAAGAGTAAGAAGAAGCATAAGAAAAAAGAAAAACAA
AAATCAAAAAAAAGAAAATCAAAGACACGTGAGGATAGTTACGAAGAAGGTGAAAGAAGG
ACTTCGTCTTCTGATGAAGCATCATCTGTTGAAAATCACACTAACTATAATGAAACGCCT
CTCACAACAGATGTGAAAGAGAATAATGAATCAGGTATAGAGTCTACTTAA
| SMART |
SWAP_N_domain (IPR019147) - T[1-90] 1.6E-5 |
| Pfam |
SWAP_N_domain (IPR019147) - T[5-86] 2.4E-10 |
| SUPERFAMILY |
SWAP/Surp_sf (IPR035967) - T[115-187] 7.19E-21 - T[187-246] 6.15E-20 - T[379-444] 4.84E-10 |
| Gene3D |
SWAP/Surp_sf (IPR035967) - T[135-188] 2.9E-25 - T[189-247] 7.7E-27 - T[393-450] 5.4E-11 |
| SMART |
Surp (IPR000061) - T[140-193] 7.2E-14 - T[194-247] 2.8E-18 - T[396-447] 5.3E-7 |
| Pfam |
Surp (IPR000061) - T[141-186] 9.4E-14 - T[195-243] 7.8E-15 |
| ProSiteProfiles |
Surp (IPR000061) - T[142-184] 15.13 - T[196-238] 15.13 - T[398-438] 10.923 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SFSWA_HUMAN | 42.598 % | 208 | 7.71E-56 |
